RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 RNF145Q96MT1 663 aa15.68■□□□□ 0.1
LDB3-208ENST00000623007 TTYH1Q9H313 450 aaPredicted RBP15.68■□□□□ 0.1
LDB3-208ENST00000623007 FGF22Q9HCT0 170 aa15.68■□□□□ 0.1
LDB3-208ENST00000623007 MRPS30Q9NP92 439 aaKnown RBP15.68■□□□□ 0.1
LDB3-208ENST00000623007 DCAF13Q9NV06 445 aaKnown RBP15.68■□□□□ 0.1
LDB3-208ENST00000623007 SH3BP4Q9P0V3 963 aa15.68■□□□□ 0.1
LDB3-208ENST00000623007 ICKQ9UPZ9 632 aa15.68■□□□□ 0.1
LDB3-208ENST00000623007 WDR37Q9Y2I8 494 aa15.68■□□□□ 0.1
LDB3-208ENST00000623007 DGKBQ9Y6T7 804 aa15.68■□□□□ 0.1
LDB3-208ENST00000623007 OR5K4A6NMS3 321 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 C10orf142B7Z368 130 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 CREG1O75629 220 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 FUCA1P04066 466 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 FURINP09958 794 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 TGM3Q08188 693 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 FADDQ13158 208 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 ELOAQ14241 798 aaKnown RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 PUS10Q3MIT2 529 aaKnown RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 DNAJC14Q6Y2X3 702 aaPredicted RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 FAM124AQ86V42 546 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 SLC30A8Q8IWU4 369 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 PHACTR4Q8IZ21 702 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 OR52E1Q8NGJ3 308 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 OR2A1Q8NGT9 310 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 CDC26Q8NHZ8 85 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 GFM2Q969S9 779 aaKnown RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 SDCCAG3Q96C92 435 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 CHID1Q9BWS9 393 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 SLC6A17Q9H1V8 727 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 OR51B5Q9H339 312 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 MIEF1Q9NQG6 463 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 PLAGL1Q9UM63 463 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 SNX7Q9UNH6 387 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 SH2B3Q9UQQ2 575 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 CFAP20Q9Y6A4 193 aaKnown RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 LAMA2P24043 3122 aaKnown RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 FAM221BA6H8Z2 402 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 TXNDC9O14530 226 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 GPR37L1O60883 481 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 KRT75O95678 551 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 LAMP1P11279 417 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 NCK1P16333 377 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 ACSL1P33121 698 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 GZMMP51124 257 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 PLIN5Q00G26 463 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 C2orf80Q0P641 193 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 EPS8Q12929 822 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 MYBPC3Q14896 1274 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 CLCA4Q14CN2 919 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 SMAD2Q15796 467 aaKnown RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 CCNYL2Q5T2Q4 361 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 KIAA0895LQ68EN5 471 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 CHRDL2Q6WN34 429 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 DCP2Q8IU60 420 aaKnown RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 ST13P4Q8IZP2 240 aaPredicted RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 RNF175Q8N4F7 328 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 NCLNQ969V3 563 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 RDH12Q96NR8 316 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 INPP5KQ9BT40 448 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 ACAT2Q9BWD1 397 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 COQ10BQ9H8M1 238 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 TPT1P8Q9HAU6 139 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 AASDHPPTQ9NRN7 309 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 DNAAF2Q9NVR5 837 aaKnown RBP15.67■□□□□ 0.1
LDB3-208ENST00000623007 ANKMY1Q9P2S6 941 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 SPASTQ9UBP0 616 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 AP4B1Q9Y6B7 739 aa15.67■□□□□ 0.1
LDB3-208ENST00000623007 RNF103-CHMP3A0A140T963 221 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 POM121BA6NF01 834 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 CLOCKO15516 846 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 RASAL1O95294 804 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 ENGP17813 658 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 MAGEA8P43361 318 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 BLKP51451 505 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 CHN2P52757 468 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 MAPK12P53778 367 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 CSNK1G2P78368 415 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 VAC14Q08AM6 782 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 RBBP4Q09028 425 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 ILF3Q12906 894 aaKnown RBP eCLIP15.66■□□□□ 0.1
LDB3-208ENST00000623007 PDK3Q15120 406 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 VMACQ2NL98 169 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 HMBOX1Q6NT76 420 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 SPRED1Q7Z699 444 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 ABI3BPQ7Z7G0 1075 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 ANKRD46Q86W74 232 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 SVOPLQ8N434 492 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 LINC01555Q8NAE3 123 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 TMEM145Q8NBT3 493 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 BMFQ96LC9 184 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 TRIM8Q9BZR9 551 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 PCED1AQ9H1Q7 454 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 SEMA6AQ9H2E6 1030 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 NEUROD4Q9HD90 331 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 CD320Q9NPF0 282 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 FZD3Q9NPG1 666 aa15.66■□□□□ 0.1
LDB3-208ENST00000623007 OR1F1O43749 312 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 PRICKLE3O43900 615 aaPredicted RBP15.65■□□□□ 0.1
LDB3-208ENST00000623007 PRSS23O95084 383 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 TNFAIP8O95379 198 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms