RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 CENPSQ8N2Z9 138 aa17.73■□□□□ 0.43
PCDHB2-202ENST00000622947 OR7A2PQ8NGA2 310 aa17.73■□□□□ 0.43
PCDHB2-202ENST00000622947 CCL4L1Q8NHW4 92 aa17.73■□□□□ 0.43
PCDHB2-202ENST00000622947 TSACCQ96A04 125 aaPredicted RBP17.73■□□□□ 0.43
PCDHB2-202ENST00000622947 TESCQ96BS2 214 aa17.73■□□□□ 0.43
PCDHB2-202ENST00000622947 INPP5KQ9BT40 448 aa17.73■□□□□ 0.43
PCDHB2-202ENST00000622947 PAIP1Q9H074 479 aaKnown RBP17.73■□□□□ 0.43
PCDHB2-202ENST00000622947 DMRT3Q9NQL9 472 aa17.73■□□□□ 0.43
PCDHB2-202ENST00000622947 BTBD3Q9Y2F9 522 aa17.73■□□□□ 0.43
PCDHB2-202ENST00000622947 PLXND1Q9Y4D7 1925 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 TRBV5-3A0A0A0MS03 114 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 SAP18O00422 153 aaKnown RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 KCNH1O95259 989 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 C1QCP02747 245 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 RPN2P04844 631 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 HOXC4P09017 264 aaPredicted RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 MTHFD1P11586 935 aaKnown RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 NCK1P16333 377 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 HNRNPA2B1P22626 353 aaKnown RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 AK4P27144 223 aaPredicted RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 MAPK1P28482 360 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 PTPN6P29350 595 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 OR4D2P58180 307 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 KIAA1024LP59773 190 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 SPPL2CQ8IUH8 684 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 FRMD1Q8N878 549 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 TMEM102Q8N9M5 508 aaPredicted RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 PLEKHA8Q96JA3 519 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 CAMK1GQ96NX5 476 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 OR51B5Q9H339 312 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 C6orf106Q9H6K1 298 aaPredicted RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 TBC1D29Q9UFV1 150 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 FANCMQ8IYD8 2048 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 LRP4O75096 1905 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 ZNF701M0R085 212 aaPredicted RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 ARPC2O15144 300 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 YY2O15391 372 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 KLHL18O94889 574 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 HOXB9P17482 250 aaPredicted RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 CDKN2CP42773 168 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 C21orf59P57076 290 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 EEFSECP57772 596 aaKnown RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 TUBA4AP68366 448 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 KCNC4Q03721 635 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 NFATC4Q14934 902 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 PGS1Q32NB8 556 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 PTRH1Q86Y79 214 aaKnown RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 SYT12Q8IV01 421 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 DENND6BQ8NEG7 585 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 CHPT1Q8WUD6 406 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 ZUFSPQ96AP4 578 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 EME1Q96AY2 570 aa17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 RUVBL1Q9Y265 456 aaKnown RBP17.72■□□□□ 0.43
PCDHB2-202ENST00000622947 LAMA1P25391 3075 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 FOXE1O00358 373 aaPredicted RBP17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 FPGTO14772 594 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 SEMA4FO95754 770 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 GBAP04062 536 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 IGHV4-34P06331 123 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 IDSP22304 550 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 S100A3P33764 101 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 EIF2B2P49770 351 aaKnown RBP17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 WNT3P56703 355 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 UAP1L1Q3KQV9 507 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 SPATS1Q496A3 300 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 OR4F3Q6IEY1 312 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 ANKRD26P1Q6NSI1 321 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 RD3Q7Z3Z2 195 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 C10orf111Q8N326 155 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 CANT1Q8WVQ1 401 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 KCTD14Q9BQ13 255 aaPredicted RBP17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 ACTR3BQ9P1U1 418 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 CA14Q9ULX7 337 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 EXO1Q9UQ84 846 aaKnown RBP17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 AP4S1Q9Y587 144 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 PCDHB14Q9Y5E9 798 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 LRRC72A6NJI9 287 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 ZNF839A8K0R7 811 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 PDZK1P1A8MUH7 402 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 SCN2BO60939 215 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 H6PDO95479 791 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 RPE65Q16518 533 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 FXNQ16595 210 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 PAGE2BQ5JRK9 111 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 LCN8Q6JVE9 175 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 TMIGD1Q6UXZ0 262 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 Q7L0L9 218 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 GPR180Q86V85 440 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 CHERPQ8IWX8 916 aaKnown RBP17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 FAM20CQ8IXL6 584 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 PGBD3Q8N328 593 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 ANKRD53Q8N9V6 530 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 TMEM145Q8NBT3 493 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 STARD8Q92502 1023 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 AURKBQ96GD4 344 aaPredicted RBP17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 OR2M4Q96R27 311 aa17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 TRNAU1APQ9NX07 287 aaKnown RBP17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 CNOT11Q9UKZ1 510 aaKnown RBP17.71■□□□□ 0.43
PCDHB2-202ENST00000622947 IGKV1-8A0A0C4DH67 115 aa17.7■□□□□ 0.42
PCDHB2-202ENST00000622947 A0A1B0GTW7 788 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms