RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 DOHHQ9BU89 302 aa9.07□□□□□ -0.96
PDPN-212ENST00000621990 WRAP53Q9BUR4 548 aaKnown RBP9.07□□□□□ -0.96
PDPN-212ENST00000621990 DPEP2Q9H4A9 486 aa9.07□□□□□ -0.96
PDPN-212ENST00000621990 REEP1Q9H902 201 aa9.07□□□□□ -0.96
PDPN-212ENST00000621990 THUMPD1Q9NXG2 353 aaKnown RBP9.07□□□□□ -0.96
PDPN-212ENST00000621990 SAMHD1Q9Y3Z3 626 aaKnown RBP9.07□□□□□ -0.96
PDPN-212ENST00000621990 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 PIPSLA2A3N6 862 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ZNF99A8MXY4 864 aaPredicted RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 MYO1GB0I1T2 1018 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 K7ESM1 405 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 SUV39H1O43463 412 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 BCAS1O75363 584 aaPredicted RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 CLPXO76031 633 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 INMTO95050 263 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 GABARAPO95166 117 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 BCL10O95999 233 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 FURINP09958 794 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 C1GALT1C1LP0DN25 315 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ACADLP28330 430 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 PIK3CBP42338 1070 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 METAP1P53582 386 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 RAB15P59190 212 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 SELENOWP63302 87 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 TAP2Q03519 686 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 FCHO2Q0JRZ9 810 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ELP6Q0PNE2 266 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 AQP6Q13520 282 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 MAD2L1BPQ15013 274 aaPredicted RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 PROX2Q3B8N5 592 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 PAGE2BQ5JRK9 111 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 CATSPEREQ5SY80 951 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 C9orf64Q5T6V5 341 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 PDE12Q6L8Q7 609 aaKnown RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 LINC00299Q6ZSB3 139 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 CCDC80Q76M96 950 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 FAM124AQ86V42 546 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 CCDC71Q8IV32 467 aaPredicted RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 NAGSQ8N159 534 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 CELF5Q8N6W0 485 aaKnown RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 TTC29Q8NA56 475 aaPredicted RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 OR9A1PQ8NGU1 263 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 POF1BQ8WVV4 589 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 PAWRQ96IZ0 340 aaKnown RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 SIGLEC11Q96RL6 698 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 RIBC2Q9H4K1 309 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 MYNNQ9NPC7 610 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 EXD2Q9NVH0 621 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ATAD3AQ9NVI7 634 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ADPRHL2Q9NX46 363 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 PCDH10Q9P2E7 1040 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 GPR34Q9UPC5 381 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 TPRKBQ9Y3C4 175 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 PCDHGA10Q9Y5H3 936 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 CHD9Q3L8U1 2897 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 GNG14A0A1W2PPG7 69 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ZNF197O14709 1029 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 XPNPEP2O43895 674 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 DIRAS1O95057 198 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 FKBP9O95302 570 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ADH1CP00326 375 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 RB1P06400 928 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 EPCAMP16422 314 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 PBLDP30039 288 aaPredicted RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 RPL3P39023 403 aaKnown RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 GJA8P48165 433 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 HBA1P69905 142 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 UBE3AQ05086 875 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 EEF1A2Q05639 463 aaKnown RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 SIM2Q14190 667 aaPredicted RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 SLBPQ14493 270 aaKnown RBP eCLIP9.06□□□□□ -0.96
PDPN-212ENST00000621990 TCEAL5Q5H9L2 206 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.06□□□□□ -0.96
PDPN-212ENST00000621990 GRASPQ7Z6J2 395 aaPredicted RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 CFAP206Q8IYR0 622 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 METTL4Q8N3J2 472 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ZNF366Q8N895 744 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 GPR156Q8NFN8 814 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 OR4A15Q8NGL6 344 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 CDC26Q8NHZ8 85 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 MAL2Q969L2 176 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 NXPE3Q969Y0 559 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ZNF707Q96C28 371 aaPredicted RBP9.06□□□□□ -0.96
PDPN-212ENST00000621990 PPP1R14BQ96C90 147 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 NUS1Q96E22 293 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 MTERF3Q96E29 417 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 HSPBAP1Q96EW2 488 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 RAD9AQ99638 391 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 RAD21L1Q9H4I0 556 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 TMEM38AQ9H6F2 299 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 TRIM39Q9HCM9 518 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 KRT84Q9NSB2 600 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 TBCCD1Q9NVR7 557 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 PCDHGB3Q9Y5G1 929 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 GMPPBQ9Y5P6 360 aa9.06□□□□□ -0.96
PDPN-212ENST00000621990 ZBBXA8MT70 800 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 PTGES3LE9PB15 166 aa9.05□□□□□ -0.96
PDPN-212ENST00000621990 KPNA3O00505 521 aaPredicted RBP9.05□□□□□ -0.96
PDPN-212ENST00000621990 FOXD2O60548 495 aaPredicted RBP9.05□□□□□ -0.96
PDPN-212ENST00000621990 NDUFS2O75306 463 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms