RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ZNF787Q6DD87 383 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 SULT1C3Q6IMI6 304 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 NXPE4Q6UWF7 544 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 IFT20Q8IY31 132 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 KLHDC8AQ8IYD2 350 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 TEX19Q8NA77 164 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 FDCSPQ8NFU4 85 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 KCTD4Q8WVF5 259 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 ESAMQ96AP7 390 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 TM4SF19Q96DZ7 209 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 PAFAH2Q99487 392 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 SARGQ9BW04 601 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 NMRAL1Q9HBL8 299 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 ANKHQ9HCJ1 492 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 MKKSQ9NPJ1 570 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-228ENST00000618469 SEMA3GQ9NS98 782 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 NUDT4Q9NZJ9 180 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 HCN3Q9P1Z3 774 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 C3orf18Q9UK00 162 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 ACOT9Q9Y305 439 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 PCDHGA9Q9Y5G4 932 aaKnown RBP15.16■□□□□ 0.02
BRCA1-228ENST00000618469 IKBKGQ9Y6K9 419 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 ZNF860A6NHJ4 632 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 MAP2K7O14733 419 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 TAPBPO15533 448 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 KERAO60938 352 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 CEACAM4O75871 244 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 C2P06681 752 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 GNAZP19086 355 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 SCTRP47872 440 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 RGS1Q08116 209 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 RBBP5Q15291 538 aaKnown RBP15.15■□□□□ 0.02
BRCA1-228ENST00000618469 TUBB8Q3ZCM7 444 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 TAOK1Q7L7X3 1001 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 ZC3H7AQ8IWR0 971 aaKnown RBP15.15■□□□□ 0.02
BRCA1-228ENST00000618469 GSPT2Q8IYD1 628 aaKnown RBP15.15■□□□□ 0.02
BRCA1-228ENST00000618469 CENPLQ8N0S6 344 aaPredicted RBP15.15■□□□□ 0.02
BRCA1-228ENST00000618469 SNX31Q8N9S9 440 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 STAG3L4Q8TBR4 150 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 SLC44A1Q8WWI5 657 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 NXNL1Q96CM4 212 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 MOCOSQ96EN8 888 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 MESP1Q9BRJ9 268 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 NUDT9Q9BW91 350 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 DNAJC11Q9NVH1 559 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 GPR83Q9NYM4 423 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 ZFP69BQ9UJL9 534 aa15.15■□□□□ 0.02
BRCA1-228ENST00000618469 A0A087WUV0 522 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-228ENST00000618469 A0A096LPK6 155 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 ENO4A6NNW6 628 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 IDSB3KWA1 339 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 POC1B-GALNT4F8VUJ3 575 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 H0YIG0 161 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 SGK494L7N484 410 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 UBXN8O00124 270 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 CCNT2O60583 730 aaKnown RBP15.14■□□□□ 0.01
BRCA1-228ENST00000618469 RDH16O75452 317 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 KLHL18O94889 574 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 ALDOAP04075 364 aaKnown RBP15.14■□□□□ 0.01
BRCA1-228ENST00000618469 ACPPP15309 386 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 TYK2P29597 1187 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 AHRP35869 848 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 GLRBP48167 497 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 PWP1Q13610 501 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 SLBPQ14493 270 aaKnown RBP eCLIP15.14■□□□□ 0.01
BRCA1-228ENST00000618469 PDK4Q16654 411 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 CDKL4Q5MAI5 379 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 TEX35Q5T0J7 233 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 FHL5Q5TD97 284 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 KIRREL2Q6UWL6 708 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 CCDC91Q7Z6B0 441 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 ISCA2Q86U28 154 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 PDSS2Q86YH6 399 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.14■□□□□ 0.01
BRCA1-228ENST00000618469 GALNT16Q8N428 558 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 ANKRD53Q8N9V6 530 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 NACC2Q96BF6 587 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 C8orf44Q96CB5 159 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 ATOH8Q96SQ7 321 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 VPS11Q9H270 941 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 GPRC5BQ9NZH0 403 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 NAALAD2Q9Y3Q0 740 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 ESPL1Q14674 2120 aa15.14■□□□□ 0.01
BRCA1-228ENST00000618469 EXOC1LA0A1B0GW35 172 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 VPS4BO75351 444 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 STK16O75716 305 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 HEXBP07686 556 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 ZNF888P0CJ79 500 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-228ENST00000618469 C1GALT1C1LP0DN25 315 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 ITGA3P26006 1051 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 GGT5P36269 586 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 XCR1P46094 333 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 KCNC1P48547 511 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 SERPINB9P50453 376 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 EEF1A2Q05639 463 aaKnown RBP15.13■□□□□ 0.01
BRCA1-228ENST00000618469 HERC3Q15034 1050 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 FAM83EQ2M2I3 478 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 MFSD4BQ5TF39 518 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 ATG9BQ674R7 924 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 FAAH2Q6GMR7 532 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms