RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 MAPRE3Q9UPY8 281 aa11.87□□□□□ -0.51
MATR3-227ENST00000618441 SNX10Q9Y5X0 201 aa11.87□□□□□ -0.51
MATR3-227ENST00000618441 DNAH12Q6ZR08 3092 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 hCG_1807616A0A1W2PRN6 198 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 INPPL1O15357 1258 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ALPIP09923 528 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 VIPR1P32241 457 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 TPI1P60174 286 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 NPRL3Q12980 569 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 CYB5R2Q6BCY4 276 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 C8orf82Q6P1X6 216 aaPredicted RBP11.86□□□□□ -0.51
MATR3-227ENST00000618441 CYHR1Q6ZMK1 362 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ENTHD1Q8IYW4 607 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 FBXO39Q8N4B4 442 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 MS4A15Q8N5U1 240 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ZNF655Q8N720 491 aaPredicted RBP11.86□□□□□ -0.51
MATR3-227ENST00000618441 OR2T35Q8NGX2 323 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ADAM19Q9H013 955 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 TUBB1Q9H4B7 451 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 BRCA2P51587 3418 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ASPDHA6ND91 283 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 RNGTTO60942 597 aaKnown RBP11.86□□□□□ -0.51
MATR3-227ENST00000618441 DHFRP00374 187 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 AKT1P31749 480 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ASPAP45381 313 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 MEOX2P50222 304 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 RPL38P63173 70 aaKnown RBP11.86□□□□□ -0.51
MATR3-227ENST00000618441 TMEM95Q3KNT9 176 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 UFD1Q92890 307 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 UPRTQ96BW1 309 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 CXorf58Q96LI9 332 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 COL21A1Q96P44 957 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ERVK-6Q9BXR3 956 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ST6GALNAC4Q9H4F1 302 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ELAC1Q9H777 363 aaKnown RBP11.86□□□□□ -0.51
MATR3-227ENST00000618441 ARHGAP28Q9P2N2 729 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 MYO10Q9HD67 2058 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 TMEM88BA6NKF7 163 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ENDOD1O94919 500 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 MLYCDO95822 493 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 CAMK2GQ13555 558 aaPredicted RBP11.86□□□□□ -0.51
MATR3-227ENST00000618441 TEAD4Q15561 434 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 HECTD2Q5U5R9 776 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 IER5Q5VY09 327 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 LETMD1Q6P1Q0 360 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 ZCCHC12Q6PEW1 402 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 AFTPHQ6ULP2 937 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 CCDC36Q8IYA8 594 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 METTL6Q8TCB7 284 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 CA5BP1Q8WTZ4 195 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 GTPBP3Q969Y2 492 aaKnown RBP11.86□□□□□ -0.51
MATR3-227ENST00000618441 NIFKQ9BYG3 293 aaKnown RBP11.86□□□□□ -0.51
MATR3-227ENST00000618441 POLR2J2Q9GZM3 115 aaKnown RBP11.86□□□□□ -0.51
MATR3-227ENST00000618441 LATS2Q9NRM7 1088 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 SMPD4Q9NXE4 827 aa11.86□□□□□ -0.51
MATR3-227ENST00000618441 SLC35F4A4IF30 521 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 FAM74A7A6NL05 159 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 ZNF487B1APH4 448 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 M0QYT0 321 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 PLA2G10O15496 165 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 OR4F21O95013 312 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 LHCGRP22888 699 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 STOMP27105 288 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 CASP9P55211 416 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 PITX1P78337 314 aaPredicted RBP11.85□□□□□ -0.51
MATR3-227ENST00000618441 SLC6A3Q01959 620 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 FGL1Q08830 312 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 PTGR1Q14914 329 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 FAM26DQ5JW98 314 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 OR2T5Q6IEZ7 315 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 DPP9Q86TI2 863 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 PTRH1Q86Y79 214 aaKnown RBP11.85□□□□□ -0.51
MATR3-227ENST00000618441 OR2T29Q8NH02 315 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 UPF1Q92900 1129 aaKnown RBP eCLIP11.85□□□□□ -0.51
MATR3-227ENST00000618441 SCRN2Q96FV2 425 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 RGS18Q9NS28 235 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 NUDT15Q9NV35 164 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 NFKBIL1Q9UBC1 381 aaPredicted RBP11.85□□□□□ -0.51
MATR3-227ENST00000618441 PCDHGB1Q9Y5G3 927 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 ADAMTSL1Q8N6G6 1762 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 TARM1B6A8C7 271 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 H0YCG3 227 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 GFRA2O00451 464 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 TXNL1O43396 289 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 RNF224P0DH78 156 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 RAB12Q6IQ22 244 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 RDH10Q8IZV5 341 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 CENPIQ92674 756 aaPredicted RBP11.85□□□□□ -0.51
MATR3-227ENST00000618441 GALPQ9UBC7 116 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 MAST2Q6P0Q8 1798 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 METTL21EPA6NDL7 271 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 CASKO14936 926 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 NDUFA2O43678 99 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 LRATO95237 230 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 RRASP10301 218 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 ANXA3P12429 323 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 SEMA3BQ13214 749 aa11.85□□□□□ -0.51
MATR3-227ENST00000618441 ANKS6Q68DC2 871 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms