RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 GLIS2Q9BZE0 524 aaPredicted RBP9.95□□□□□ -0.82
CUL4A-212ENST00000617546 FN3KQ9H479 309 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 SMPD4Q9NXE4 827 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 A0A1B0GVC2 190 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 CHRNB1P11230 501 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 HMGCS1Q01581 520 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 RAPSNQ13702 412 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 GANABQ14697 944 aaKnown RBP9.95□□□□□ -0.82
CUL4A-212ENST00000617546 PON3Q15166 354 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 PLEKHN1Q494U1 663 aaPredicted RBP9.95□□□□□ -0.82
CUL4A-212ENST00000617546 IQCF2Q8IXL9 164 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 NEIL3Q8TAT5 605 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 ZFP90Q8TF47 636 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 CLEC4CQ8WTT0 213 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 TAS2R3Q9NYW6 316 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 SLC2A6Q9UGQ3 507 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 OARD1Q9Y530 152 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 CDC7O00311 574 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 LYRM1O43325 122 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 TLX2O43763 284 aaPredicted RBP9.95□□□□□ -0.82
CUL4A-212ENST00000617546 GADD45AP24522 165 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 DIO3P55073 304 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 CLDN8P56748 225 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 S100A12P80511 92 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 POU4F2Q12837 409 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 GRB7Q14451 532 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 PRPF38BQ5VTL8 546 aaKnown RBP9.95□□□□□ -0.82
CUL4A-212ENST00000617546 MOB2Q70IA6 237 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 ZNF598Q86UK7 904 aaKnown RBP9.95□□□□□ -0.82
CUL4A-212ENST00000617546 ZDHHC14Q8IZN3 488 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 BBS10Q8TAM1 723 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 NDNFQ8TB73 568 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 SLC22A17Q8WUG5 538 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 NDRG1Q92597 394 aaKnown RBP9.95□□□□□ -0.82
CUL4A-212ENST00000617546 COPS5Q92905 334 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 COL26A1Q96A83 441 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 NELL2Q99435 816 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 TMED9Q9BVK6 235 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 NIPAL2Q9H841 368 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 TMEM248Q9NWD8 314 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 OR10H1Q9Y4A9 318 aa9.95□□□□□ -0.82
CUL4A-212ENST00000617546 A8MV72 311 aaPredicted RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 PCDH17O14917 1159 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 RGS9O75916 674 aaPredicted RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 POP4O95707 220 aaKnown RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 ELFN1P0C7U0 828 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 PRKACAP17612 351 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 UQCRC2P22695 453 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 STXBP1P61764 594 aaKnown RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 XKR4Q5GH76 650 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 FAM46CQ5VWP2 391 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 NUDT13Q86X67 352 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 CEP97Q8IW35 865 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 OR5T2Q8NGG2 359 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 OR13C4Q8NGS5 318 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 ART5Q96L15 291 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 TMEM168Q9H0V1 697 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 CUEDC1Q9NWM3 386 aaPredicted RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 SLC39A1Q9NY26 324 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 PCDHB11Q9Y5F2 797 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 GRIN3BO60391 1043 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 SMIM18P0DKX4 95 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 NDUFV1P49821 464 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 TRAM2Q15035 370 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 ATP6V1C2Q8NEY4 427 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 NFKBIDQ8NI38 313 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 ACDQ96AP0 544 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 OR4K3Q96R72 315 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 TSNAXQ99598 290 aaKnown RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 TAS2R8Q9NYW2 309 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 ACSL5Q9ULC5 683 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 KCPQ6ZWJ8 1503 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 TNFRSF10AO00220 468 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 CREBL2O60519 120 aaPredicted RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 NIPSNAP2O75323 286 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 SEC14L2O76054 403 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 ATXN8OSP0DMR3 200 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 GPX3P22352 226 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 DCTP40126 519 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 CCR4P51679 360 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 TAF10Q12962 218 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 NFE2L1Q14494 772 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 NTRK2Q16620 822 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 ATCAYQ86WG3 371 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 OR10H5Q8NGA6 315 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 EXOSC8Q96B26 276 aaKnown RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 CDK15Q96Q40 435 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 SLC30A3Q99726 388 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 ATG10Q9H0Y0 220 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 LYARQ9NX58 379 aaKnown RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 NUFIP1Q9UHK0 495 aaKnown RBP9.94□□□□□ -0.82
CUL4A-212ENST00000617546 CYTH4Q9UIA0 394 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 C4AP0C0L4 1744 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 C4BP0C0L5 1744 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 MMP3P08254 477 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 KCNE1P15382 129 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 CA5AP35218 305 aa9.94□□□□□ -0.82
CUL4A-212ENST00000617546 PPIGQ13427 754 aaKnown RBP eCLIP9.94□□□□□ -0.821e-7■□□□□ 9.9
CUL4A-212ENST00000617546 GRB14Q14449 540 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms