RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 CLEC4AQ9UMR7 237 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 VPS9D1Q9Y2B5 631 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 SPIN1Q9Y657 262 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 GSAPA4D1B5 854 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 SLC35F4A4IF30 521 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 F8W810 466 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 FZD9O00144 591 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 LRRTM2O43300 516 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 TPST2O60704 377 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 STK16O75716 305 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 UGT2B17O75795 530 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 TOXO94900 526 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 SMIM10L2AP0DMW4 78 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 SMIM10L2BP0DMW5 78 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PRKAR1AP10644 381 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ODC1P11926 461 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ZNF250P15622 560 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PRKACAP17612 351 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 SSTR2P30874 369 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 MLLT3P42568 568 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 MAGEA11P43364 429 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 MAP2K3P46734 347 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ABATP80404 500 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 MAB21L1Q13394 359 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 SPHARQ15513 63 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 DUSP7Q16829 419 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ESCO2Q56NI9 601 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 MS4A13Q5J8X5 152 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 DDI2Q5TDH0 399 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PAQR6Q6TCH4 344 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 TMIGD1Q6UXZ0 262 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 C16orf59Q7L2K0 433 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 DENND1CQ8IV53 801 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.44□□□□□ -1.38
LMO3-235ENST00000616247 BBS7Q8IWZ6 715 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 AQP11Q8NBQ7 271 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 MDGA1Q8NFP4 955 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 TRMT61AQ96FX7 289 aaKnown RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 APIPQ96GX9 242 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PKP4Q99569 1192 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 TRIM62Q9BVG3 475 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 DPCDQ9BVM2 203 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 TM6SF2Q9BZW4 377 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 CDCP1Q9H5V8 836 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 CLMPQ9H6B4 373 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 POPDC3Q9HBV1 291 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 NPAP1Q9NZP6 1156 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 MARCH2Q9P0N8 246 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 RBPJLQ9UBG7 517 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 CRLS1Q9UJA2 301 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 AP3M1Q9Y2T2 418 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PRG3Q9Y2Y8 225 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 HCN4Q9Y3Q4 1203 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PRAMEF33A0A0G2JMD5 474 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 LOC285095A0A1B0GVY8 99 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 HHLA1C9JL84 531 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ADAMDEC1O15204 470 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PRAMEF10O60809 474 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 WISP3O95389 354 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 CLDN9O95484 217 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PRLP01236 227 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 GBAP04062 536 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 PDGFAP04085 211 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 TP53P04637 393 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 ALPIP09923 528 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 DDCP20711 480 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 GZMKP49863 264 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 RAB8AP61006 207 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 RAB14P61106 215 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 FXNQ16595 210 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ZSWIM7Q19AV6 140 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 CDONQ4KMG0 1287 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 CTSL3PQ5NE16 218 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 CASP12Q6UXS9 341 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 CCDC149Q6ZUS6 474 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 BHLHA9Q7RTU4 235 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ZNF551Q7Z340 670 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 SCD5Q86SK9 330 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 Q8N402 240 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 LSMEM1Q8N8F7 131 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 SYT14Q8NB59 555 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 GALNT11Q8NCW6 608 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 NLGN4YQ8NFZ3 816 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 OR5AK3PQ8NH89 298 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ZFAND1Q8TCF1 268 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ZNF431Q8TF32 576 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 CRELD1Q96HD1 420 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 C8orf48Q96LL4 319 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 FAM129BQ96TA1 746 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 MRPL9Q9BYD2 267 aaKnown RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 BARHL1Q9BZE3 327 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ACPTQ9BZG2 426 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ATP13A1Q9HD20 1204 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ELOVL2Q9NXB9 296 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 GLTPQ9NZD2 209 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ZNF624Q9P2J8 865 aaPredicted RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 TMCC3Q9ULS5 477 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 ERVW-1Q9UQF0 538 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 MRPS7Q9Y2R9 242 aaKnown RBP6.44□□□□□ -1.38
LMO3-235ENST00000616247 YARS2Q9Y2Z4 477 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms