RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 NAA30Q147X3 362 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 NSDHLQ15738 373 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 MCEMP1Q8IX19 187 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 ZNF808Q8N4W9 903 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 AFAP1L2Q8N4X5 818 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 ZNF740Q8NDX6 193 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 ABHD11Q8NFV4 315 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 GRK7Q8WTQ7 553 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 MOCOSQ96EN8 888 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 HIST1H2AHQ96KK5 128 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 OR1F2PQ96R84 312 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 LPAR4Q99677 370 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 HIST1H2AJQ99878 128 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 UTP23Q9BRU9 249 aaKnown RBP19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 HAUS8Q9BT25 410 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 H2AFJQ9BTM1 129 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 KLHL1Q9NR64 748 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 SLC17A6Q9P2U8 582 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 TTI1O43156 1089 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 NDUFS4O43181 175 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 DNAJB6O75190 326 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 AHSGP02765 367 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 CCR8P51685 355 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 PGGT1BP53609 377 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 USP10Q14694 798 aaKnown RBP19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 HERC3Q15034 1050 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 OR1C1Q15619 314 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 MSS51Q4VC12 460 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 SPINK14Q6IE38 97 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 BNC2Q6ZN30 1099 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 CNTN4Q8IWV2 1026 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 SCMH1Q96GD3 660 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 OR4K3Q96R72 315 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 SARGQ9BW04 601 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 ARL15Q9NXU5 204 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 NCOA6Q14686 2063 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 PCNX1Q96RV3 2341 aa19.54■□□□□ 0.72
TRAPPC3-208ENST00000616074 DCHS2Q6V1P9 2916 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 GABRR3A8MPY1 467 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 MAGEB17A8MXT2 336 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 FAM227AF5H4B4 570 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 OR1F1O43749 312 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 GALR3O60755 368 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 SLC19A2O60779 497 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 TTC4O95801 387 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 B3GALT4O96024 378 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 IL10P22301 178 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 OLR1P78380 273 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 ACTN3Q08043 901 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 PPP1R7Q15435 360 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 C3AR1Q16581 482 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 SPANXN3Q5MJ09 141 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 DUPD1Q68J44 220 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 MTFR2Q6P444 385 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 RPTNQ6XPR3 784 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 OR4K1Q8NGD4 311 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 OR56A3Q8NH54 315 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 GABPB2Q8TAK5 448 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 ACTRT1Q8TDG2 376 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 SNF8Q96H20 258 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 TSPAN10Q9H1Z9 355 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 SPNS1Q9H2V7 528 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 PDZD2O15018 2839 aa19.53■□□□□ 0.72
TRAPPC3-208ENST00000616074 ASPDHA6ND91 283 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 DNALI1O14645 258 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 SERPIND1P05546 499 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 FHP07954 510 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 ALOX12P18054 663 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 HTR1EP28566 365 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 EEF1DP29692 281 aaKnown RBP19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 OR4D2P58180 307 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 SLC26A5P58743 744 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 IL2P60568 153 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 PDAP1Q13442 181 aaKnown RBP19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 DEFB134Q4QY38 66 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 CATSPEREQ5SY80 951 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 KIAA0408Q6ZU52 694 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 IGDCC3Q8IVU1 814 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 SLC5A8Q8N695 610 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 TBC1D20Q96BZ9 403 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 CERS2Q96G23 380 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 GPR137Q96N19 417 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 OSBPL9Q96SU4 736 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 TINAGQ9UJW2 476 aa19.52■□□□□ 0.72
TRAPPC3-208ENST00000616074 GOLGA6L10A0A0M3HER8 536 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 TRBC2A0A5B9 178 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 PABPN1LA6NDY0 278 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 CHST10O43529 356 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 CD46P15529 392 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 CASP6P55212 293 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 AP1S2P56377 157 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 ADORA2A-AS1P86434 159 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 ALDH6A1Q02252 535 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 OC90Q02509 493 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 PWP1Q13610 501 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 ZNF630Q2M218 657 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 HECTD2Q5U5R9 776 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 GALNTL5Q7Z4T8 443 aa19.51■□□□□ 0.71
TRAPPC3-208ENST00000616074 GALNT7Q86SF2 657 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms