RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 POLR2JP52435 117 aaKnown RBP12.27□□□□□ -0.44
TCF4-248ENST00000616053 ZNF718Q3SXZ3 478 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 TBRG1Q3YBR2 411 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 CDHR3Q6ZTQ4 885 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 ANKRD46Q86W74 232 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 PRR22Q8IZ63 422 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 SLC44A1Q8WWI5 657 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 SEZ6LQ9BYH1 1024 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 GIN1Q9NXP7 522 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 COPZ2Q9P299 210 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 CER1O95813 267 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 OR8H3Q8N146 312 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 PORCNQ9H237 461 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 PRDM12Q9H4Q4 367 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 RAB26Q9ULW5 256 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 WDPCPO95876 746 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 SMPD1P17405 629 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 MAMLD1Q13495 774 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 SSX2Q16385 188 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 FAM110CQ1W6H9 321 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 CRB2Q5IJ48 1285 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 MRPL21Q7Z2W9 205 aaKnown RBP12.27□□□□□ -0.44
TCF4-248ENST00000616053 CMIPQ8IY22 773 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 GATSQ8NAP1 163 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 ZNF566Q969W8 418 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 C2orf42Q9NWW7 574 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 NUDT4Q9NZJ9 180 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 EPHA6Q9UF33 1036 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 PCDHGC4Q9Y5F7 938 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 HMGN1P05114 100 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 ADARP55265 1226 aaKnown RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 DCDC1P59894 354 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 RNF111Q6ZNA4 994 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 ESPNLQ6ZVH7 1005 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 AKAP14Q86UN6 197 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 PPTC7Q8NI37 304 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 TSPEARQ8WU66 669 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 UCN3Q969E3 161 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 GPR21Q99679 349 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 SNRNP25Q9BV90 132 aaKnown RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 PCDHGA5Q9Y5G8 931 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 TAL1P17542 331 aaPredicted RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 SLC3A1Q07837 685 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 ASTE1Q2TB18 679 aaPredicted RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 RALGPS2Q86X27 583 aaPredicted RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 PLEKHO2Q8TD55 490 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 SFXN2Q96NB2 322 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 EBF3Q9H4W6 596 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 THUMPD1Q9NXG2 353 aaKnown RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 LCHNA4D1U4 455 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 TREHO43280 583 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 NADKO95544 446 aaPredicted RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 ETV5P41161 510 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 PSMA6P60900 246 aaKnown RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 ANKRD23Q86SG2 305 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 AUTS2Q8WXX7 1259 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 TSPAN6O43657 245 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 LCMT2O60294 686 aaKnown RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 SLC36A3Q495N2 470 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 KIAA1614Q5VZ46 1190 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 ZNF75CPQ92670 426 aaPredicted RBP12.27□□□□□ -0.45
TCF4-248ENST00000616053 TIMD4Q96H15 378 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 GBA3Q9H227 469 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 TMEM134Q9H6X4 195 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 SLC2A8Q9NY64 477 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 ARHGAP20Q9P2F6 1191 aa12.27□□□□□ -0.45
TCF4-248ENST00000616053 J3QLW9 94 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 AXIN1O15169 862 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 SDC3O75056 442 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 SCAF4O95104 1147 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 CD46P15529 392 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 ZNF19P17023 458 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 CLCN4P51793 760 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 PLEKHN1Q494U1 663 aaPredicted RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 PAN3Q58A45 887 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 VWA2Q5GFL6 755 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 USP51Q70EK9 711 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 PIM3Q86V86 326 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 PAPD5Q8NDF8 572 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 MTERF1Q99551 399 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 ZNF282Q9UDV7 671 aaPredicted RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 FXYD6-FXYD2A0A087WZ82 144 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 E7ESA3 106 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 ZBTB22O15209 634 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 ORC5O43913 435 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 MMP20O60882 483 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 GALTP07902 379 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 HTD2P86397 168 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 ENPP6Q6UWR7 440 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 TCTEX1D2Q8WW35 142 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 POLDIP3Q9BY77 421 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 FXYD6Q9H0Q3 95 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 MYEF2Q9P2K5 600 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 ELOVL7A1L3X0 281 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 GABRR3A8MPY1 467 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 GRID2O43424 1007 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 MATKP42679 507 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 RARRES1P49788 294 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 TYSND1Q2T9J0 566 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms