RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CARD18P57730 90 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 DNAJB13P59910 316 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SLC41A1Q8IVJ1 513 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ADGRF4Q8IZF3 695 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR6F1Q8NGZ6 308 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR2L2Q8NH16 312 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 DOK1Q99704 481 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FNDC11Q9BVV2 318 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 C11orf49Q9H6J7 331 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TCRBV7S2A1N4TA0A589 114 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 LINC00862A6NCI5 91 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 HSD17B1P14061 328 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TPH1P17752 444 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 RAVER1Q8IY67 606 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MOCOSQ96EN8 888 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PYURFQ96I23 114 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF768Q9H5H4 540 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF223Q9UK11 482 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 USP17L3A6NCW0 530 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 USP17L4A6NCW7 530 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR10H3O60404 316 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MAKP20794 623 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SEMA3BQ13214 749 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FLYWCH1Q4VC44 716 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TEX261Q6UWH6 196 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 USP17L1Q7RTZ2 530 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 KLHL36Q8N4N3 616 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MINDY1Q8N5J2 469 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SEMA4DQ92854 862 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 C14orf79Q96F83 325 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF559Q9BR84 538 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 KCNJ16Q9NPI9 418 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TAS2R13Q9NYV9 303 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TFCP2L1Q9NZI6 479 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 POMT1Q9Y6A1 747 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 U3KQ87 197 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 RNF212BA8MTL3 300 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 CASC3O15234 703 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 RETP07949 1114 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 HPGDP15428 266 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 HCCSP53701 268 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 GBE1Q04446 702 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OPCMLQ14982 345 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FCN2Q15485 313 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ALG11Q2TAA5 492 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SSX8Q7RTT4 187 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MRPL41Q8IXM3 137 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ARL14Q8N4G2 192 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 IL17RCQ8NAC3 791 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR10K1Q8NGX5 313 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF649Q9BS31 505 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 EIF2B3Q9NR50 452 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF358Q9NW07 568 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 NHSL1Q5SYE7 1610 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OTCP00480 354 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 IFNA2P01563 188 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MT-ND2P03891 347 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MAPK3P27361 379 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 GSK3BP49841 420 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 C2orf80Q0P641 193 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 UBXN2BQ14CS0 331 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 LRRC26Q2I0M4 334 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 INAVAQ3KP66 663 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ATG9BQ674R7 924 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 HIST2H2AA3Q6FI13 130 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 C1orf52Q8N6N3 182 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 GPR151Q8TDV0 419 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR14A2Q96R54 314 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF607Q96SK3 696 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FAM117AQ9C073 453 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 HEMK1Q9Y5R4 338 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 A0A0G2JMP0 313 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 ARPC5O15511 151 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 LRRTM2O43300 516 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CPSF4O95639 269 aaKnown RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 NAGAP17050 411 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 KCNQ1P51787 676 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CBWD3Q5JTY5 395 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CBWD5Q5RIA9 395 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CD276Q5ZPR3 534 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CERS6Q6ZMG9 384 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 OR4M2Q8NGB6 313 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 SHROOM3Q8TF72 1996 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 DPY19L1Q2PZI1 675 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 PIWIL3Q7Z3Z3 882 aaKnown RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 KDF1Q8NAX2 398 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 SMPDL3AQ92484 453 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 FBXW5Q969U6 566 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 RPRD1AQ96P16 312 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 C1QTNF7Q9BXJ2 289 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 GOLT1BQ9Y3E0 138 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 XIRP1Q702N8 1843 aaKnown RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 LOC100509620A0A075B734 347 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 GH2P01242 217 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CSKP41240 450 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 GRIK2Q13002 908 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 GDPD3Q7L5L3 318 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 LGR4Q9BXB1 951 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CFAP97Q9P2B7 532 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms