RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 MORF4L2Q15014 288 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 MAPKAPK3Q16644 382 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 MEP1AQ16819 746 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GXYLT1Q4G148 440 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PCID2Q5JVF3 399 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 LDLRAP1Q5SW96 308 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 FBXW10Q5XX13 1052 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RTL6Q6ICC9 239 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ZNF227Q86WZ6 799 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CRLF3Q8IUI8 442 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 KLHL7Q8IXQ5 586 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PPIL6Q8IXY8 311 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 LGI4Q8N135 537 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CEP112Q8N8E3 955 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 OR52K1Q8NGK4 314 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 OR5M3Q8NGP4 307 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 STYXQ8WUJ0 223 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NAT14Q8WUY8 206 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SH3GL2Q99962 352 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TUBB6Q9BUF5 446 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 OR52A5Q9H2C5 316 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 MVB12BQ9H7P6 319 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 BFARQ9NZS9 450 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 FAM8A1Q9UBU6 413 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ASIC3Q9UHC3 531 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 KLHL20Q9Y2M5 609 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 UTP11Q9Y3A2 253 aaKnown RBP6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SPO11Q9Y5K1 396 aa6.75□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GLYATL1P3A0A0U1RQE8 302 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CTAGE15A4D2H0 777 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SLC35F4A4IF30 521 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GABRR3A8MPY1 467 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 DNALI1O14645 258 aaPredicted RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RASGRF2O14827 1237 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 HS6ST1O60243 411 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NME2P1O60361 137 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CDC40O60508 579 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PRMT3O60678 531 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GOSR1O95249 250 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CTAGE8P0CG41 777 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 MAGP20916 626 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NME2P22392 152 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TACR1P25103 407 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ACVR2AP27037 513 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PEBP1P30086 187 aaKnown RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ZNF140P52738 457 aaPredicted RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 DMTNQ08495 405 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 BOP1Q14137 746 aaKnown RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CAPRIN1Q14444 709 aaKnown RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TRIP13Q15645 432 aaPredicted RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 FAM214AQ32MH5 1076 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 FBXL19-AS1Q494R0 122 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ZNF658BQ4V348 819 aaPredicted RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 BCL7AQ4VC05 210 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GLE1Q53GS7 698 aaKnown RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 FAM182AQ5T1J6 154 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RNASEH2BQ5TBB1 312 aaKnown RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ZNF468Q5VIY5 522 aaPredicted RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PLAG1Q6DJT9 500 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PRMT9Q6P2P2 845 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ARHGAP11AQ6P4F7 1023 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 UNC5DQ6UXZ4 953 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 DET1Q7L5Y6 550 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 WDR53Q7Z5U6 358 aaPredicted RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PRUNE1Q86TP1 453 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CTAGE6Q86UF2 777 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CTAGE4Q8IX94 777 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NAT8LQ8N9F0 302 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 POGLUT1Q8NBL1 392 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PPHLN1Q8NEY8 458 aaKnown RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 OR52N2Q8NGI0 321 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 C16orf52Q8NHV5 167 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 HEXDCQ8WVB3 486 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SNF8Q96H20 258 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 KRT12Q99456 494 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 APOL2Q9BQE5 337 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 HGH1Q9BTY7 390 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 FAM129AQ9BZQ8 928 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RAB17Q9H0T7 212 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PNPLA3Q9NST1 481 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NLE1Q9NVX2 485 aaPredicted RBP6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SMOXQ9NWM0 555 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ARL5AQ9Y689 179 aa6.74□□□□□ -1.33
PTCHD3P1-201ENST00000612350 HYKKA2RU49 373 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SDR42E2A6NKP2 422 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CLCA1A8K7I4 914 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 AGAP14A8MT82 685 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 EFCAB8A8MWE9 144 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GAPDHSO14556 408 aaPredicted RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 FFAR3O14843 346 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TFECO14948 347 aaPredicted RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GPR42O15529 346 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 DNAJB6O75190 326 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SLC25A12O75746 678 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PDE9AO76083 593 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SRP72O76094 671 aaKnown RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SEC31AO94979 1220 aaKnown RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 HEXBP07686 556 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NID1P14543 1247 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TPH1P17752 444 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms