RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 NPIPB15A6NHN6 443 aaPredicted RBP14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 GABRR3A8MPY1 467 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 CTGFP29279 349 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 TAF1CQ15572 869 aaPredicted RBP14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 COX20Q5RI15 118 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 ANGPTL8Q6UXH0 198 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 ZNF852Q6ZMS4 543 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 TPGS1Q6ZTW0 290 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 PLD4Q96BZ4 506 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 TSEN34Q9BSV6 310 aaKnown RBP14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 SLC12A9Q9BXP2 914 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 IMPAD1Q9NX62 359 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 WBP11Q9Y2W2 641 aaKnown RBP14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 OR51B4Q9Y5P0 310 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 NPIPB8E9PQR5 432 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 ARHGAP33O14559 1287 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 NDUFB5O43674 189 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 GPX5O75715 221 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 SNX4O95219 450 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 ETHE1O95571 254 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 CYBAP13498 195 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 CXCR2P25025 360 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 TNFSF8P32971 234 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 SOX6P35712 828 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 NSG1P42857 185 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 AP1S1P61966 158 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 BCL2L1Q07817 233 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 KRR1Q13601 381 aaKnown RBP14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 DMC1Q14565 340 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 SSX1Q16384 188 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 HKDC1Q2TB90 917 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 ATP13A5Q4VNC0 1218 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 APCDD1Q8J025 514 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 C17orf50Q8WW18 174 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 GTPBP3Q969Y2 492 aaKnown RBP14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 CDK5RAP1Q96SZ6 601 aaKnown RBP14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 MGLLQ99685 303 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 SLC30A2Q9BRI3 323 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 OR2B2Q9GZK3 357 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 DNAJC11Q9NVH1 559 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 OGDHLQ9ULD0 1010 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 KLK4Q9Y5K2 254 aa14.56□□□□□ -0.08
PCDHGB1-202ENST00000611598 FRMPD3Q5JV73 1810 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 PNMA8CA0A1B0GUJ8 204 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 LINC00854A0A1B0GVQ3 168 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 H3BM21 787 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 ADAMDEC1O15204 470 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 ETFAP13804 333 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 JUPP14923 745 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 PCGF2P35227 344 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 SELENOWP63302 87 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 CSTF3Q12996 717 aaKnown RBP14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 FUT10Q6P4F1 479 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 ASB11Q8WXH4 323 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 CEP19Q96LK0 163 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 GPATCH2Q9NW75 528 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 VPS29Q9UBQ0 182 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 MUTYHQ9UIF7 546 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 POFUT2Q9Y2G5 429 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 PCDH17O14917 1159 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 SCAMP2O15127 329 aaKnown RBP14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 SEMA3DO95025 777 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 SLC10A3P09131 477 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 HIST1H2AGP0C0S8 130 aaPredicted RBP14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 CBSLP0DN79 551 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 HIST1H2ADP20671 130 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 AZGP1P25311 298 aaKnown RBP14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 CBSP35520 551 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 PFN3P60673 137 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 GPR33Q49SQ1 333 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 LYPLAL1Q5VWZ2 237 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 ZNF544Q6NX49 715 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 SERPINA13PQ6UXR4 307 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 BBS7Q8IWZ6 715 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 DENND6BQ8NEG7 585 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 VANGL1Q8TAA9 524 aaPredicted RBP14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 PIK3R3Q92569 461 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 ALG14Q96F25 216 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 HIST1H2AHQ96KK5 128 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 HIST1H2AJQ99878 128 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 H2AFJQ9BTM1 129 aa14.55□□□□□ -0.08
PCDHGB1-202ENST00000611598 RGS5O15539 181 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 ADAMTS4O75173 837 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 CRATP43155 626 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 RFX2P48378 723 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 TGM4P49221 684 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 SLC11A1P49279 550 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 OLR1P78380 273 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 IRF8Q02556 426 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 ACSM2AQ08AH3 577 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 GPR50Q13585 617 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 MICAQ29983 383 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 ACSM2BQ68CK6 577 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 C19orf48Q6RUI8 117 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 TMC5Q6UXY8 1006 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 ZNF367Q7RTV3 350 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 CACTIN-AS1Q8N1I8 211 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 C11orf65Q8NCR3 313 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 ST6GAL2Q96JF0 529 aa14.54□□□□□ -0.08
PCDHGB1-202ENST00000611598 BARHL1Q9BZE3 327 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms