RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 C3orf14Q9HBI5 128 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 NFKBIL1Q9UBC1 381 aaPredicted RBP14.16□□□□□ -0.14
VPS36-207ENST00000611132 MGAT4BQ9UQ53 548 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 IRAK3Q9Y616 596 aa14.16□□□□□ -0.14
VPS36-207ENST00000611132 DNTTP04053 509 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 S100A9P06702 114 aaKnown RBP14.15□□□□□ -0.14
VPS36-207ENST00000611132 FAUP35544 74 aaKnown RBP14.15□□□□□ -0.14
VPS36-207ENST00000611132 SMSP52788 366 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 AP3S2P59780 193 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 SMN1Q16637 294 aaKnown RBP14.15□□□□□ -0.14
VPS36-207ENST00000611132 ADGRF1Q5T601 910 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 TBPL2Q6SJ96 375 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 NOXA1Q86UR1 476 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 Q8N402 240 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 SLC5A8Q8N695 610 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 AKAP1Q92667 903 aaKnown RBP eCLIP14.15□□□□□ -0.14
VPS36-207ENST00000611132 DLEC1Q9Y238 1755 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 SLC38A8A6NNN8 435 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 SULT1C4O75897 302 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 F2P00734 622 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 ELFN1P0C7U0 828 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 PPP3R1P63098 170 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 FAM189BP81408 668 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 KIAA1161Q6NSJ0 714 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 VMP1Q96GC9 406 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 IL1RAPQ9NPH3 570 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 RDH8Q9NYR8 311 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 HCN2Q9UL51 889 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 ADRA1AP35348 466 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 SLC9A3P48764 834 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 CRISP1P54107 249 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 STEAP3Q658P3 488 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 ZNF467Q7Z7K2 595 aaPredicted RBP14.15□□□□□ -0.14
VPS36-207ENST00000611132 ZNF655Q8N720 491 aaPredicted RBP14.15□□□□□ -0.14
VPS36-207ENST00000611132 GTF2H4Q92759 462 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 AP2M1Q96CW1 435 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 ZNF583Q96ND8 569 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 TMED9Q9BVK6 235 aa14.15□□□□□ -0.14
VPS36-207ENST00000611132 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 PLD2O14939 933 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 MID1O15344 667 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 PDPK1O15530 556 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 TGFB1P01137 390 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 GSTM3P21266 225 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 CPN2P22792 545 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 C21orf33P30042 268 aaPredicted RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 EMP3P54852 163 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 ZNF267Q14586 743 aaPredicted RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 EIF4HQ15056 248 aaKnown RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 ATP13A5Q4VNC0 1218 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 SLITRK4Q8IW52 837 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 VWA5B2Q8N398 1253 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 OR4K1Q8NGD4 311 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 INPP5KQ9BT40 448 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 EFCAB11Q9BUY7 163 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 CHIAQ9BZP6 476 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 EQTNQ9NQ60 294 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 CRYZL1O95825 349 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 BCHEP06276 602 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 CLK3P49761 638 aaKnown RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 FPGSQ05932 587 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 TBCEQ15813 527 aaPredicted RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 ADPRMQ3LIE5 342 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 CYP27C1Q4G0S4 372 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 ZNF767PQ75MW2 155 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 PHC2Q8IXK0 858 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 TOMM5Q8N4H5 51 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 C2orf73Q8N5S3 287 aaPredicted RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 BEND7Q8N7W2 519 aaPredicted RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 PIP5K1AQ99755 562 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 SPATA9Q9BWV2 254 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 GKN1Q9NS71 199 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 STUB1Q9UNE7 303 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 SH3D21A4FU49 640 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 ZBTB42B2RXF5 422 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 REM1O75628 298 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 RAB36O95755 333 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 C6orf47O95873 294 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 DGKGP49619 791 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 PITPNAQ00169 270 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 RBBP4Q09028 425 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 CEACAM20Q6UY09 585 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 THOC6Q86W42 341 aaKnown RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 ZNF433Q8N7K0 673 aaPredicted RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 ADAMTS15Q8TE58 950 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 ZBED6CLQ96FA7 236 aaPredicted RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 TRIB3Q96RU7 358 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 TMX2-CTNND1H3BSU7 103 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 H7C0S8 307 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 JRKO75564 520 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 PFKLP17858 780 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 PRKCDQ05655 676 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 SF3B4Q15427 424 aaKnown RBP eCLIP14.14□□□□□ -0.159e-7■■■■■ 50.3
VPS36-207ENST00000611132 NDUFA9Q16795 377 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 MPPE1Q53F39 396 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 C22orf42Q6IC83 251 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 USP50Q70EL3 339 aaPredicted RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 ZNF548Q8NEK5 533 aaPredicted RBP14.14□□□□□ -0.15
VPS36-207ENST00000611132 OR10H4Q8NGA5 316 aa14.14□□□□□ -0.15
VPS36-207ENST00000611132 OR8J1Q8NGP2 316 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms