RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SRP54P61011 504 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ACVR1Q04771 509 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 DSC1Q08554 894 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ATAD3BQ5T9A4 648 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF691Q5VV52 312 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CPZQ66K79 652 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TSPYL5Q86VY4 417 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 RAB43Q86YS6 212 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CYP4Z2PQ8N1L4 340 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 IL17FQ96PD4 163 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 GFM1Q96RP9 751 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 RHNO1Q9BSD3 238 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CLMPQ9H6B4 373 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 COMMD3Q9UBI1 195 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ENTPD4Q9Y227 616 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 POFUT2Q9Y2G5 429 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 PCDHB11Q9Y5F2 797 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 INSL5Q9Y5Q6 135 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 FAM92AA1XBS5 289 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ZW10O43264 779 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 OR1F1O43749 312 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TLX2O43763 284 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 PLOD3O60568 738 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 PSIP1O75475 530 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ITIH1P19827 911 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 NOS3P29474 1203 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 NTSP30990 170 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 IDUAP35475 653 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TALDO1P37837 337 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ANXA11P50995 505 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CSNK2BP67870 215 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 NKG7Q16617 165 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CRTC2Q53ET0 693 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 RNASE12Q5GAN4 147 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 C10orf62Q5T681 223 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 C9orf64Q5T6V5 341 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ZDHHC20Q5W0Z9 365 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 PLET1Q6UQ28 207 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 PLEKHG7Q6ZR37 379 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CCDC149Q6ZUS6 474 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TCEANCQ8N8B7 351 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 HUS1BQ8NHY5 278 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TP53INP1Q96A56 240 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 DUS3LQ96G46 650 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 IGSF21Q96ID5 467 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TEFMQ96QE5 360 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 DOHHQ9BU89 302 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 OR51E2Q9H255 320 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TBC1D17Q9HA65 648 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 IL1RAPQ9NPH3 570 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 NECTIN3Q9NQS3 549 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC25A37Q9NYZ2 338 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 PTGFRNQ9P2B2 879 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF624Q9P2J8 865 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 SPIN1Q9Y657 262 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 WNT6Q9Y6F9 365 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 POLR2AP24928 1970 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 KIAA0100Q14667 2235 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 GLOD5A6NK44 160 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TLL1O43897 1013 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 SOCS5O75159 536 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 SEC14L2O76054 403 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ADH1AP07327 375 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 JUPP14923 745 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TGFBR1P36897 503 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 MAGEA10P43363 369 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CD97P48960 835 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 DAPP51397 102 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TAS2R41P59536 307 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 DSTNP60981 165 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 MC1RQ01726 317 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 PTSQ03393 145 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 MAD2L1BPQ15013 274 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 QPRTQ15274 297 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 KLHL12Q53G59 568 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TMEM53Q6P2H8 277 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CCBE1Q6UXH8 406 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 MTSS1LQ765P7 747 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TMEM179BQ7Z7N9 219 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 DSG4Q86SJ6 1040 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TRIM48Q8IWZ4 208 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ALDH16A1Q8IZ83 802 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC7A5P1Q8MH63 180 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC43A3Q8NBI5 491 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TEX47Q8TBZ9 253 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 WFDC5Q8TCV5 224 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TRIB3Q96RU7 358 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 MGLLQ99685 303 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 BEX2Q9BXY8 128 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TRIT1Q9H3H1 467 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 MAGIXQ9H6Y5 334 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 RMI1Q9H9A7 625 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 NTN4Q9HB63 628 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 LHX3Q9UBR4 397 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ITGB1BP2Q9UKP3 347 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CFL2Q9Y281 166 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 MRPS23Q9Y3D9 190 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TRBV23OR9-2A0A075B6M9 112 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 FAM240BA0A1B0GVZ2 78 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 FABP12A6NFH5 140 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms