RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 OR3A1P47881 315 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 OR3A2P47893 321 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 SNU13P55769 128 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 XGP55808 180 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 CSNK2BP67870 215 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 ASIC1P78348 528 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 CDH18Q13634 790 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 EFTUD2Q15029 972 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 KBTBD12Q3ZCT8 623 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 GLRA4Q5JXX5 417 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNF770Q6IQ21 691 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 IYDQ6PHW0 289 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 FIP1L1Q6UN15 594 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 NHLRC1Q6VVB1 395 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 CLYBLQ8N0X4 340 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 OTUD6BQ8N6M0 293 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 TCEANCQ8N8B7 351 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 ADAD2Q8NCV1 583 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 HCAR2Q8TDS4 363 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 NXPE2Q96DL1 559 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNF486Q96H40 463 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 ASCL2Q99929 193 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 CLEC7AQ9BXN2 247 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 TDRD1Q9BXT4 1180 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 PANK4Q9NVE7 773 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 TMOD3Q9NYL9 352 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 HACD3Q9P035 362 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 CACNG5Q9UF02 275 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 FBXL4Q9UKA2 621 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 PPP1R3CQ9UQK1 317 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 SELENOKQ9Y6D0 94 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 NPHP3Q7Z494 1330 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 SYNRGQ9UMZ2 1314 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 A0A087X002 238 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 A0A1W2PR80 420 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 C15orf61A6NNL5 157 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 A8MVM7 634 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 MAGEC1O60732 1142 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 CYTIPO60759 359 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 CRCPO75575 148 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 SLC16A8O95907 504 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 AADACP22760 399 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 SOX3P41225 446 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 OR3A3P47888 321 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 SLC6A12P48065 614 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 ATP12AP54707 1039 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 OR1D5P58170 312 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 AKAP17AQ02040 695 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 GUCY2DQ02846 1103 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 ABRQ12979 859 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 SRSF9Q13242 221 aaKnown RBP eCLIP3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 RCN2Q14257 317 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 TMEM187Q14656 261 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNF674Q2M3X9 581 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 SMU1Q2TAY7 513 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 CCDC92Q53HC0 331 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNF789Q5FWF6 425 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 SLC10A5Q5PT55 438 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 KLHL10Q6JEL2 608 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 ADAM5Q6NVV9 412 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 DHRS11Q6UWP2 260 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 C2orf48Q96LS8 159 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 NEDD4LQ96PU5 975 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNF350Q9GZX5 532 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 CHMP4BQ9H444 224 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 C5orf66Q9H5L9 145 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 EXOC1Q9NV70 894 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 CNIH4Q9P003 139 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 TMEM181Q9P2C4 612 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 KLHL8Q9P2G9 620 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 PILRBQ9UKJ0 227 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 ODF2LQ9ULJ1 636 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 ITM2BQ9Y287 266 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 NCKAP1Q9Y2A7 1128 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 PCDHGA1Q9Y5H4 931 aa3.72□□□□□ -1.81
SMCHD1-213ENST00000609587 ACEP12821 1306 aa3.71□□□□□ -1.81
SMCHD1-213ENST00000609587 ANTXRLA6NF34 631 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 PGRMC2O15173 223 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 SCO2O43819 266 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 KIF5CO60282 957 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 FMO6PO60774 539 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 NME6O75414 186 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 ZNF821O75541 412 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 NXPH2O95156 264 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 CLDN1O95832 211 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 CGAP01215 116 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 GOT1P17174 413 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 HLA-FP30511 346 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 OPRL1P41146 370 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 STX1BP61266 288 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 TRA2AQ13595 282 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 PPA1Q15181 289 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 TAB1Q15750 504 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 DUSP5Q16690 384 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 HLA-BQ31612 363 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 ODF2Q5BJF6 829 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 ARMCX4Q5H9R4 360 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 WLSQ5T9L3 541 aa3.71□□□□□ -1.82
SMCHD1-213ENST00000609587 PM20D1Q6GTS8 502 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms