RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SLAMF1Q13291 335 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 DMP1Q13316 513 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MTM1Q13496 603 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 GRAPQ13588 217 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RCAN2Q14206 197 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 GRM3Q14832 879 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAD2L1BPQ15013 274 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 QPRTQ15274 297 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR19Q15760 415 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 BAK1Q16611 211 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PRSS53Q2L4Q9 553 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 BTBD16Q32M84 506 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PAN2Q504Q3 1202 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 KLHL12Q53G59 568 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RUNDC3AQ59EK9 446 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TECRLQ5HYJ1 363 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 EMC4Q5J8M3 183 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 OTUD3Q5T2D3 398 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PHF19Q5T6S3 580 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TYW3Q6IPR3 259 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SDE2Q6IQ49 451 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MZT2BQ6NZ67 158 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 DENND1BQ6P3S1 775 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMEM81Q6P7N7 255 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 DPP8Q6V1X1 898 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM183BPQ6ZVS7 135 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ANKS3Q6ZW76 656 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 DET1Q7L5Y6 550 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 KRT74Q7RTS7 529 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 OVCH2Q7RTZ1 564 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR155Q7Z3F1 870 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CUZD1Q86UP6 607 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RASAL3Q86YV0 1011 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZDHHC17Q8IUH5 632 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CHPFQ8IZ52 775 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 UBE2J2Q8N2K1 259 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 LILRB2Q8N423 598 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 LIX1Q8N485 282 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RCBTB1Q8NDN9 531 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MCPH1Q8NEM0 835 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 LPCAT1Q8NF37 534 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 NUDT10Q8NFP7 164 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ITFG1Q8TB96 612 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SETD7Q8WTS6 366 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RXFP2Q8WXD0 754 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ST8SIA4Q92187 359 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TFAP2BQ92481 460 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 AKAP1Q92667 903 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RBPMSQ93062 196 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 HGDQ93099 445 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RHBDF1Q96CC6 855 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TUBGCP3Q96CW5 907 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 C11orf24Q96F05 449 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 WBP1Q96G27 269 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 NUDT11Q96G61 164 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SHDQ96IW2 340 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CPB2Q96IY4 423 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MSLNLQ96KJ4 702 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MRGPRX3Q96LB0 322 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TEKT5Q96M29 485 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCDC140Q96MF4 163 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 UROC1Q96N76 676 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SERPINB11Q96P15 392 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 COL21A1Q96P44 957 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 GNRHR2Q96P88 292 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TRNT1Q96Q11 434 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 REG4Q9BYZ8 158 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 BRINP2Q9C0B6 783 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ARHGAP39Q9C0H5 1083 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PITHD1Q9GZP4 211 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCDC90BQ9GZT6 254 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 OSBPL2Q9H1P3 480 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MEGF9Q9H1U4 602 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SMOC1Q9H4F8 434 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PRDM12Q9H4Q4 367 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 GSTO2Q9H4Y5 243 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 DHX35Q9H5Z1 703 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 GAREM1Q9H706 876 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SEC61A2Q9H9S3 476 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 UCK1Q9HA47 277 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SMURF2Q9HAU4 748 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 FOLH1BQ9HBA9 442 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 EMC7Q9NPA0 242 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 KMT5AQ9NQR1 393 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RGS18Q9NS28 235 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CISHQ9NSE2 258 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 LYARQ9NX58 379 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 EMC3Q9P0I2 261 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 FBXO40Q9UH90 709 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC23A1Q9UHI7 598 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ENOPH1Q9UHY7 261 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PSORS1C1Q9UIG5 152 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ADAM29Q9UKF5 820 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ACAD8Q9UKU7 415 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RAB23Q9ULC3 237 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMCC3Q9ULS5 477 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAGED2Q9UNF1 606 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SNX6Q9UNH7 406 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZFR2Q9UPR6 939 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 LIPT1Q9Y234 373 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms