RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 VANGL1Q8TAA9 524 aaPredicted RBP4.2□□□□□ -1.74
SH3D19-213ENST00000604922 PRPF31Q8WWY3 499 aaKnown RBP4.2□□□□□ -1.74
SH3D19-213ENST00000604922 AZIN2Q96A70 460 aa4.2□□□□□ -1.74
SH3D19-213ENST00000604922 NSMCE3Q96MG7 304 aa4.2□□□□□ -1.74
SH3D19-213ENST00000604922 PARK7Q99497 189 aaKnown RBP4.2□□□□□ -1.74
SH3D19-213ENST00000604922 SEPHS2Q99611 448 aa4.2□□□□□ -1.74
SH3D19-213ENST00000604922 OLFM1Q99784 485 aa4.2□□□□□ -1.74
SH3D19-213ENST00000604922 OR2B2Q9GZK3 357 aa4.2□□□□□ -1.74
SH3D19-213ENST00000604922 EQTNQ9NQ60 294 aa4.2□□□□□ -1.74
SH3D19-213ENST00000604922 MRPL15Q9P015 296 aaKnown RBP4.2□□□□□ -1.74
SH3D19-213ENST00000604922 TBC1D29Q9UFV1 150 aa4.2□□□□□ -1.74
SH3D19-213ENST00000604922 MOB4Q9Y3A3 225 aa4.2□□□□□ -1.74
SH3D19-213ENST00000604922 SPTBN2O15020 2390 aa4.2□□□□□ -1.74
SH3D19-213ENST00000604922 TP53BP1Q12888 1972 aaPredicted RBP4.2□□□□□ -1.74
SH3D19-213ENST00000604922 MAST4O15021 2626 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 C2orf81A6NN90 581 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 GLRA3O75311 464 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 MMP12P39900 470 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 HNF4AP41235 474 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 SNAPC1Q16533 368 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 C2CD6Q53TS8 623 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 G2E3Q7L622 706 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.19□□□□□ -1.74
SH3D19-213ENST00000604922 SMAP2Q8WU79 429 aaPredicted RBP4.19□□□□□ -1.74
SH3D19-213ENST00000604922 SLCO2A1Q92959 643 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 SLC22A18Q96BI1 424 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 PIGQQ9BRB3 760 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 WWTR1Q9GZV5 400 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 TRPV4Q9HBA0 871 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 FAM207AQ9NSI2 230 aaPredicted RBP4.19□□□□□ -1.74
SH3D19-213ENST00000604922 TNNQ9UQP3 1299 aa4.19□□□□□ -1.74
SH3D19-213ENST00000604922 KMT2EQ8IZD2 1858 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 MED23Q9ULK4 1368 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 C15orf61A6NNL5 157 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 A8MV72 311 aaPredicted RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 ENTPD3O75355 529 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 CDK2AP2O75956 126 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 JAK1P23458 1154 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 DNASE1P24855 282 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 CSTF2P33240 577 aaKnown RBP eCLIP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 EIF2DP41214 584 aaKnown RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 LMAN1P49257 510 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 CDH13P55290 713 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 TAF10Q12962 218 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 HSPB3Q12988 150 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 BAATQ14032 418 aaPredicted RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 HERC3Q15034 1050 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 SNAI3Q3KNW1 292 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 CBWD6Q4V339 395 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 TAF1BQ53T94 588 aaPredicted RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 SYT14P1Q58G82 188 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 CBWD3Q5JTY5 395 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 SLC35D3Q5M8T2 416 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 SPDYCQ5MJ68 293 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 IL27RAQ6UWB1 636 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 TMEM207Q6UWW9 146 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 OR10S1Q8NGN2 331 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 OR6S1Q8NH40 331 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 PTERQ96BW5 349 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 SPDL1Q96EA4 605 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 ZNF300Q96RE9 604 aaPredicted RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 SLC35C2Q9NQQ7 365 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 SLC7A10Q9NS82 523 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 C19orf25Q9UFG5 118 aaPredicted RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 TRMT112Q9UI30 125 aaKnown RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 STUB1Q9UNE7 303 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 PPIEQ9UNP9 301 aaKnown RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 ANGPTL3Q9Y5C1 460 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 EP300Q09472 2414 aaPredicted RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 ASH1LQ9NR48 2969 aaKnown RBP4.18□□□□□ -1.74
SH3D19-213ENST00000604922 NAV2Q8IVL1 2488 aa4.18□□□□□ -1.74
SH3D19-213ENST00000604922 CEP250Q9BV73 2442 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 SPEF2Q9C093 1822 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 TMEM221A6NGB7 291 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 GJB3O75712 270 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 SMIM18P0DKX4 95 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 MYL6BP14649 208 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 PFKFB1P16118 471 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 PORP16435 677 aaPredicted RBP4.17□□□□□ -1.74
SH3D19-213ENST00000604922 PTPN3P26045 913 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 OPRL1P41146 370 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 LEPRP48357 1165 aaKnown RBP4.17□□□□□ -1.74
SH3D19-213ENST00000604922 NOVP48745 357 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 CYCSP99999 105 aaKnown RBP4.17□□□□□ -1.74
SH3D19-213ENST00000604922 MS4A2Q01362 244 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 ZNF415Q09FC8 603 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 ELAVL2Q12926 359 aaKnown RBP4.17□□□□□ -1.74
SH3D19-213ENST00000604922 STK4Q13043 487 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 MEA1Q16626 185 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 XKR3Q5GH77 459 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 SLC25A53Q5H9E4 307 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 SLC25A47Q6Q0C1 308 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 TSPAN14Q8NG11 270 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 ZNF519Q8TB69 540 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 MAPK15Q8TD08 544 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 SYN2Q92777 582 aaPredicted RBP4.17□□□□□ -1.74
SH3D19-213ENST00000604922 ARSGQ96EG1 525 aa4.17□□□□□ -1.74
SH3D19-213ENST00000604922 THOC1Q96FV9 657 aaKnown RBP4.17□□□□□ -1.74
SH3D19-213ENST00000604922 NECTIN4Q96NY8 510 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms