RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.3	□□□□□ -0.76
NUP62-222	ENST00000600935	TSR3	Q9UJK0	312 aa	Known RBP	10.3	□□□□□ -0.76
NUP62-222	ENST00000600935	RIMKLB	Q9ULI2	386 aa		10.3	□□□□□ -0.76
NUP62-222	ENST00000600935	MRFAP1	Q9Y605	127 aa		10.3	□□□□□ -0.76
NUP62-222	ENST00000600935		A0A1W2PPR1	153 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	MACROD2	A1Z1Q3	448 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	ZNF860	A6NHJ4	632 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	FIGNL2	A6NMB9	653 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	FAM166B	A8MTA8	275 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	INAFM1	C9JVW0	142 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935		E7ENX8	843 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935		H7BY64	318 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	STK10	O94804	968 aa	Known RBP	10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	GLS	O94925	669 aa	Predicted RBP	10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	SLC16A8	O95907	504 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	IGHG3	P01860	377 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	DCAF7	P61962	342 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	NKX6-1	P78426	367 aa	Predicted RBP	10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	TAP2	Q03519	686 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	ARHGAP19	Q14CB8	494 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	FASTKD1	Q53R41	847 aa	Known RBP	10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	CTSL3P	Q5NE16	218 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	ZNF585A	Q6P3V2	769 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	OTOA	Q7RTW8	1153 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	CYP4Z2P	Q8N1L4	340 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	KCT2	Q8NC54	265 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	OR52K1	Q8NGK4	314 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	OR6P1	Q8NGX9	317 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	ZCCHC10	Q8TBK6	192 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	MAGEC3	Q8TD91	643 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	ZNF480	Q8WV37	535 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	TM4SF19	Q96DZ7	209 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	PRAP1	Q96NZ9	151 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	OR1F2P	Q96R84	312 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	SMC6	Q96SB8	1091 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	PKP4	Q99569	1192 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	TTC1	Q99614	292 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	DNAJC7	Q99615	494 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	CHP1	Q99653	195 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	FERMT1	Q9BQL6	677 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	NEUROD4	Q9HD90	331 aa		10.29	□□□□□ -0.76
NUP62-222	ENST00000600935	KCNE1B	A0A087WTH5	132 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935		A0A1B0GVC2	190 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	OR14I1	A6ND48	311 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	SAGE2P	A6NJ88	616 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	SLC16A5	O15375	505 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	AKR1B10	O60218	316 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	PSIP1	O75475	530 aa	Known RBP	10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	CCNDBP1	O95273	360 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	FH	P07954	510 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	RPS3	P23396	243 aa	Known RBP eCLIP	10.28	□□□□□ -0.76	1e-7	■□□□□ 10.8
NUP62-222	ENST00000600935	CTNNA2	P26232	953 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	UQCRC1	P31930	480 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	GRIA1	P42261	906 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	PNLIPRP1	P54315	467 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	HADHB	P55084	474 aa	Known RBP	10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	GDF10	P55107	478 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	PPIA	P62937	165 aa	Known RBP	10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	TSTA3	Q13630	321 aa	Predicted RBP	10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	ANKRD20A4	Q4UJ75	823 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	CCDC181	Q5TID7	509 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	SHE	Q5VZ18	495 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	PTRHD1	Q6GMV3	140 aa	Known RBP	10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	KIAA0408	Q6ZU52	694 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	SEM1	Q6ZVN7	128 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	ADCK2	Q7Z695	626 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	SPNS2	Q8IVW8	549 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	FAM71D	Q8N9W8	422 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	APCDD1L	Q8NCL9	501 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	GSDMB	Q8TAX9	411 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	MCOLN3	Q8TDD5	553 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	CREB3L4	Q8TEY5	395 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	LRRC45	Q96CN5	670 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	FOPNL	Q96NB1	174 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	BIRC8	Q96P09	236 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	PANX3	Q96QZ0	392 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	SARG	Q9BW04	601 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	BEX4	Q9NWD9	120 aa	Predicted RBP	10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	UTP6	Q9NYH9	597 aa	Known RBP	10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	GALP	Q9UBC7	116 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	ZNF223	Q9UK11	482 aa	Predicted RBP	10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	EFR3B	Q9Y2G0	817 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	NAALAD2	Q9Y3Q0	740 aa		10.28	□□□□□ -0.76
NUP62-222	ENST00000600935	SVEP1	Q4LDE5	3571 aa		10.27	□□□□□ -0.76
NUP62-222	ENST00000600935		H7C1Q1	480 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	SMAP	O00193	183 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	FCHO1	O14526	889 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	BCKDK	O14874	412 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	KPNA5	O15131	536 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	KIF5C	O60282	957 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	ITGA10	O75578	1167 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	TUBB4A	P04350	444 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	TACR1	P25103	407 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	ATP5D	P30049	168 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	PTPN7	P35236	360 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	COIL	P38432	576 aa	Predicted RBP	10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	PEX19	P40855	299 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	UBASH3A	P57075	661 aa		10.27	□□□□□ -0.77
NUP62-222	ENST00000600935	COPS2	P61201	443 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms