RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 DRG1Q9Y295 367 aaKnown RBP5.73□□□□□ -1.49
VRK3-220ENST00000600259 DHRS7Q9Y394 339 aa5.73□□□□□ -1.49
VRK3-220ENST00000600259 SLC22A7Q9Y694 548 aa5.73□□□□□ -1.49
VRK3-220ENST00000600259 INTS1Q8N201 2190 aaKnown RBP5.73□□□□□ -1.49
VRK3-220ENST00000600259 FBN3Q75N90 2809 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 IGKV3D-11A0A0A0MRZ8 115 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 A0A1B0GTH9 108 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 CTAGE15A4D2H0 777 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 NKX2-6A6NCS4 301 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 ZNF839A8K0R7 811 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 E7EVH7 732 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 PRRG2O14669 202 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 NDC80O14777 642 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 FANCGO15287 622 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 CHST10O43529 356 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 KIF5CO60282 957 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 RDH16O75452 317 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 SLC25A12O75746 678 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 TSPAN12O95859 305 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 B3GALT4O96024 378 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 UQCRHP07919 91 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 F7P08709 466 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 SMIM10L1P0DMW3 83 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 NPPBP16860 134 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 TFEBP19484 476 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 OGNP20774 298 aaKnown RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 IL10P22301 178 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 HRH2P25021 359 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 MSX1P28360 303 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 PTGS2P35354 604 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 HLCSP50747 726 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 GPR143P51810 404 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 ART1P52961 327 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 IST1P53990 364 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 DLX5P56178 289 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 OR4D2P58180 307 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 RPS15AP62244 130 aaKnown RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 BTG2P78543 158 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 OC90Q02509 493 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 ACTN3Q08043 901 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 SNX1Q13596 522 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 CUL1Q13616 776 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 TSTA3Q13630 321 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 ABRAXAS2Q15018 415 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 KCTD19Q17RG1 926 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 KIAA0930Q6ICG6 404 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 MRNIPQ6NTE8 343 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 NEPROQ6NW34 567 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 DRICH1Q6PGQ1 229 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 KIAA0408Q6ZU52 694 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 CEP128Q6ZU80 1094 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 SDCCAG8Q86SQ7 713 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 CTAGE6Q86UF2 777 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 CAND1Q86VP6 1230 aaKnown RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 CCDC71Q8IV32 467 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 SULF2Q8IWU5 870 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 SLC5A8Q8N695 610 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 HORMAD2Q8N7B1 307 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 UBL4BQ8N7F7 174 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 ZFP62Q8NB50 900 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 POGLUT1Q8NBL1 392 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 CAMKVQ8NCB2 501 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 ASB5Q8WWX0 329 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 PEX11GQ96HA9 241 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 SMIM10Q96HG1 83 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 OR1F2PQ96R84 312 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 SGPP1Q9BX95 441 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 DLL4Q9NR61 685 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 FAM114A2Q9NRY5 505 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 SYBUQ9NX95 663 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 BFARQ9NZS9 450 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 ZNF223Q9UK11 482 aaPredicted RBP5.72□□□□□ -1.49
VRK3-220ENST00000600259 SOX13Q9UN79 622 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 NAALAD2Q9Y3Q0 740 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 CLDN16Q9Y5I7 305 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 CAPN6Q9Y6Q1 641 aa5.72□□□□□ -1.49
VRK3-220ENST00000600259 FLNAP21333 2647 aaKnown RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 HRNRQ86YZ3 2850 aaPredicted RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 SCN3AQ9NY46 2000 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ZCWPW2A0A1B0GU75 182 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 TCRBV16S1A1N1A0A5B0 115 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ZNF860A6NHJ4 632 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 TMEM200CA6NKL6 621 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 FOXO6A8MYZ6 492 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ZBTB14O43829 449 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 PEX1O43933 1283 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 HS6ST1O60243 411 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 KLK8O60259 260 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 GALR3O60755 368 aaPredicted RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 AVILO75366 819 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CDC123O75794 336 aaPredicted RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 FHP07954 510 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CD99P14209 185 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ZNF24P17028 368 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CHRNB4P30926 498 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 RFC3P40938 356 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 MAGEA6P43360 314 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CYB561P49447 251 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 MEOX1P50221 254 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ITGA8P53708 1063 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms