RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	ASPG	Q86U10	573 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	SLC26A11	Q86WA9	606 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	CREG2	Q8IUH2	290 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	NAT8L	Q8N9F0	302 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	DNAJB8	Q8NHS0	232 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	ACTRT1	Q8TDG2	376 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	EEF1AKMT1	Q8WVE0	214 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	MAGOHB	Q96A72	148 aa	Known RBP	13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	SGPP1	Q9BX95	441 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	KLHL1	Q9NR64	748 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	HOMER3	Q9NSC5	361 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	IARS2	Q9NSE4	1012 aa	Known RBP	13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	TRMT6	Q9UJA5	497 aa	Known RBP	13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	NAALAD2	Q9Y3Q0	740 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	EIF3F	O00303	357 aa	Predicted RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	TSPAN12	O95859	305 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	SNRPB2	P08579	225 aa	Known RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	AP2B1	P63010	937 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	OLR1	P78380	273 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	DHX9	Q08211	1270 aa	Known RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	NAE1	Q13564	534 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	CRYM	Q14894	314 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	OR1C1	Q15619	314 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	CYP1B1	Q16678	543 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	SFT2D3	Q587I9	215 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	PAPD4	Q6PIY7	484 aa	Known RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	RASGEF1C	Q8N431	466 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	KIF2B	Q8N4N8	673 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF740	Q8NDX6	193 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	SUN3	Q8TAQ9	357 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	ALKBH8	Q96BT7	664 aa	Known RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	SCMH1	Q96GD3	660 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	PEX11G	Q96HA9	241 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	FRMD6	Q96NE9	622 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	OR4K3	Q96R72	315 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	SPNS1	Q9H2V7	528 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	KCNK13	Q9HB14	408 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	PLAC1	Q9HBJ0	212 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	ANKH	Q9HCJ1	492 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	SUCO	Q9UBS9	1254 aa	Known RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	TEKT2	Q9UIF3	430 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	COMMD10	Q9Y6G5	202 aa		13.81	□□□□□ -0.2
IRF3-223	ENST00000599223	MAGEB16	A2A368	324 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	FAM227A	F5H4B4	570 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	C19orf84	I3L1E1	186 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	HRH2	P25021	359 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	HTR1E	P28566	365 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	CD96	P40200	585 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	AGTR2	P50052	363 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	SP140	Q13342	867 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	USP10	Q14694	798 aa	Known RBP	13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	NAA30	Q147X3	362 aa	Predicted RBP	13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF630	Q2M218	657 aa	Predicted RBP	13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	SPINK14	Q6IE38	97 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	CCDC137	Q6PK04	289 aa	Known RBP	13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	PAQR3	Q6TCH7	311 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	PCGF5	Q86SE9	256 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	C17orf64	Q86WR6	236 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	AFAP1L2	Q8N4X5	818 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	MFSD9	Q8NBP5	474 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	CAMKV	Q8NCB2	501 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	PYCR2	Q96C36	320 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	THAP11	Q96EK4	314 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	LINGO1	Q96FE5	620 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	GPR137	Q96N19	417 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	FAM167B	Q9BTA0	163 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	TRIM8	Q9BZR9	551 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	PCBD2	Q9H0N5	130 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	MMP25	Q9NPA2	562 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	IKZF3	Q9UKT9	509 aa		13.8	□□□□□ -0.2
IRF3-223	ENST00000599223	ASPDH	A6ND91	283 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	GABRR3	A8MPY1	467 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	CCDC188	H7C350	402 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	NDUFS4	O43181	175 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	NEURL1	O76050	574 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	C8G	P07360	202 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	NPPB	P16860	134 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	ELAVL4	P26378	380 aa	Known RBP	13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	SLC26A5	P58743	744 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	HSF1	Q00613	529 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	NSDHL	Q15738	373 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	EXT1	Q16394	746 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	ERCC6L	Q2NKX8	1250 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	MSS51	Q4VC12	460 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	LCTL	Q6UWM7	567 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	RPTN	Q6XPR3	784 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	IGDCC3	Q8IVU1	814 aa		13.79	□□□□□ -0.2
IRF3-223	ENST00000599223	SIAH3	Q8IW03	269 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms