RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 MYO1HQ8N1T3 1032 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 KIF2BQ8N4N8 673 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 MFSD9Q8NBP5 474 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 ZNF740Q8NDX6 193 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 PBKQ96KB5 322 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 OR4K3Q96R72 315 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 UTP23Q9BRU9 249 aaKnown RBP9.91□□□□□ -0.82
LSM4-205ENST00000597776 MMP25Q9NPA2 562 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 TAS2R13Q9NYV9 303 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 SCN2AQ99250 2005 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 CTAGE15A4D2H0 777 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 GABRR3A8MPY1 467 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 MAGEB17A8MXT2 336 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 TTI1O43156 1089 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 OR1F1O43749 312 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 TSPAN12O95859 305 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 AHSGP02765 367 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 CCND1P24385 295 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 GRK3P35626 688 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 CCR8P51685 355 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 OR4D2P58180 307 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 SLC26A5P58743 744 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 ADORA2A-AS1P86434 159 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 OC90Q02509 493 aaPredicted RBP9.9□□□□□ -0.82
LSM4-205ENST00000597776 RBPJQ06330 500 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 USP10Q14694 798 aaKnown RBP9.9□□□□□ -0.82
LSM4-205ENST00000597776 MEP1AQ16819 746 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 DEFB134Q4QY38 66 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 MSS51Q4VC12 460 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 CATSPEREQ5SY80 951 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 LCTLQ6UWM7 567 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 BNC2Q6ZN30 1099 aaPredicted RBP9.9□□□□□ -0.82
LSM4-205ENST00000597776 PCGF5Q86SE9 256 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 CTAGE6Q86UF2 777 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 IGDCC3Q8IVU1 814 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 ZNF808Q8N4W9 903 aaPredicted RBP9.9□□□□□ -0.82
LSM4-205ENST00000597776 AFAP1L2Q8N4X5 818 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 SLC5A8Q8N695 610 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 ABHD11Q8NFV4 315 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 M1APQ8TC57 530 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 SCMH1Q96GD3 660 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 MAGED4Q96JG8 741 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 TSNARE1Q96NA8 513 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 FRMD6Q96NE9 622 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 LPAR4Q99677 370 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 HAUS8Q9BT25 410 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 SPNS1Q9H2V7 528 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 PLAC1Q9HBJ0 212 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 ARL15Q9NXU5 204 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 JRKLQ9Y4A0 524 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 KLF2Q9Y5W3 355 aaPredicted RBP9.9□□□□□ -0.82
LSM4-205ENST00000597776 SLC22A7Q9Y694 548 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 PDZD2O15018 2839 aa9.9□□□□□ -0.82
LSM4-205ENST00000597776 TRBC2A0A5B9 178 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 NPIPA5E9PKD4 350 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 SLC16A5O15375 505 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 CHST10O43529 356 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 NRDCO43847 1150 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 GALR3O60755 368 aaPredicted RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 B4GALT2O60909 372 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 NEURL1O76050 574 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 GUCA1CO95843 209 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 FHP07954 510 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 HIST1H2AGP0C0S8 130 aaPredicted RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 ZNF888P0CJ79 500 aaPredicted RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 CD46P15529 392 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 ALOX12P18054 663 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 HIST1H2ADP20671 130 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 ELAVL4P26378 380 aaKnown RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 EEF1DP29692 281 aaKnown RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 FNTAP49354 379 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 CASP6P55212 293 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 IL2P60568 153 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 ALDH6A1Q02252 535 aaKnown RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 HERC3Q15034 1050 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 PPP1R7Q15435 360 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 CDSNQ15517 529 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 ZNF630Q2M218 657 aaPredicted RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.89□□□□□ -0.832e-9■■■□□ 15.1
LSM4-205ENST00000597776 SPANXN3Q5MJ09 141 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 HP1BP3Q5SSJ5 553 aaPredicted RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 ZNF468Q5VIY5 522 aaPredicted RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 MTFR2Q6P444 385 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 RPTNQ6XPR3 784 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 NCCRP1Q6ZVX7 275 aaPredicted RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 GALNTL5Q7Z4T8 443 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 CYP4X1Q8N118 509 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 GPATCH11Q8N954 259 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 PLPP5Q8NEB5 264 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 OR4K1Q8NGD4 311 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 OR56A3Q8NH54 315 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 NEIL2Q969S2 332 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 TBC1D20Q96BZ9 403 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 SNF8Q96H20 258 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 HIST1H2AHQ96KK5 128 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 GPR137Q96N19 417 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 OR1F2PQ96R84 312 aa9.89□□□□□ -0.83
LSM4-205ENST00000597776 NAP1L3Q99457 506 aaPredicted RBP9.89□□□□□ -0.83
LSM4-205ENST00000597776 OLFM1Q99784 485 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms