RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ZNF888P0CJ79 500 aaPredicted RBP10.53□□□□□ -0.72
LIG1-211ENST00000596457 TAC1P20366 129 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 EMP3P54852 163 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 MAT1AQ00266 395 aaKnown RBP10.53□□□□□ -0.72
LIG1-211ENST00000596457 GTF2H2Q13888 395 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 NKG7Q16617 165 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 VWA2Q5GFL6 755 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 MFSD4BQ5TF39 518 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 PRAMEF9Q5VWM5 478 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 GTF2H2CQ6P1K8 395 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 MRPL14Q6P1L8 145 aaKnown RBP10.53□□□□□ -0.72
LIG1-211ENST00000596457 PRMT9Q6P2P2 845 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 BORAQ6PGQ7 559 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 TMIGD1Q6UXZ0 262 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 RPS27LQ71UM5 84 aaKnown RBP10.53□□□□□ -0.72
LIG1-211ENST00000596457 COX15Q7KZN9 410 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 GOLGA7Q7Z5G4 137 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.53□□□□□ -0.72
LIG1-211ENST00000596457 TRPV3Q8NET8 790 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 ACMSDQ8TDX5 336 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 MZB1Q8WU39 189 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 UBTD2Q8WUN7 234 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 MIEF2Q96C03 454 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 PTCD3Q96EY7 689 aaKnown RBP10.53□□□□□ -0.72
LIG1-211ENST00000596457 KLHL31Q9H511 634 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 PPCSQ9HAB8 311 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 ACSS2Q9NR19 701 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 HCN3Q9P1Z3 774 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 TRPC4Q9UBN4 977 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 CTSFQ9UBX1 484 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 ZNF282Q9UDV7 671 aaPredicted RBP10.53□□□□□ -0.72
LIG1-211ENST00000596457 POLHQ9Y253 713 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 MAN2B2Q9Y2E5 1009 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 TNPO3Q9Y5L0 923 aaKnown RBP10.53□□□□□ -0.72
LIG1-211ENST00000596457 SCN2AQ99250 2005 aa10.53□□□□□ -0.72
LIG1-211ENST00000596457 CELSR3Q9NYQ7 3312 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 A0A0G2JN53 185 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 ARGFXA6NJG6 315 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 KLK8O60259 260 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 CDH16O75309 829 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 RDH16O75452 317 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 KLF7O75840 302 aaPredicted RBP10.52□□□□□ -0.73
LIG1-211ENST00000596457 EPORP19235 508 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 AHRP35869 848 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 CCR10P46092 362 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 RAB8AP61006 207 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 CHAF1BQ13112 559 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 LAPTM5Q13571 262 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 PWP1Q13610 501 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 DDX39BQ13838 428 aaKnown RBP10.52□□□□□ -0.73
LIG1-211ENST00000596457 LY6DQ14210 128 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 SSPNQ14714 243 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 PCBP2Q15366 365 aaKnown RBP eCLIP10.52□□□□□ -0.73
LIG1-211ENST00000596457 RBBP7Q16576 425 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 UGT8Q16880 541 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 LINC00303Q3SY05 128 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 PAGE2BQ5JRK9 111 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 FAAH2Q6GMR7 532 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 TMEM214Q6NUQ4 689 aaKnown RBP10.52□□□□□ -0.73
LIG1-211ENST00000596457 PCSK4Q6UW60 755 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 TDRPQ86YL5 185 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 RAB43Q86YS6 212 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 C4orf33Q8N1A6 199 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 CCDC63Q8NA47 563 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 NT5CQ8TCD5 201 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 FKBP10Q96AY3 582 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 CATSPER2Q96P56 530 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 EFCAB11Q9BUY7 163 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 SARGQ9BW04 601 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 NOL11Q9H8H0 719 aaKnown RBP10.52□□□□□ -0.73
LIG1-211ENST00000596457 IPPKQ9H8X2 491 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 ACTR8Q9H981 624 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 DCDC2Q9UHG0 476 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 RAB21Q9UL25 225 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 ZNF490Q9ULM2 529 aaPredicted RBP10.52□□□□□ -0.73
LIG1-211ENST00000596457 TMCO1Q9UM00 188 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 NAALAD2Q9Y3Q0 740 aa10.52□□□□□ -0.73
LIG1-211ENST00000596457 URADA6NGE7 173 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 A8MT66 165 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 COPEO14579 308 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 GLRA3O75311 464 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 KLHL18O94889 574 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 NSA2O95478 260 aaKnown RBP10.51□□□□□ -0.73
LIG1-211ENST00000596457 ALBP02768 609 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 HEXBP07686 556 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 GSTA1P08263 222 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 NUDT17P0C025 328 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 SBK3P0C264 359 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ZGLP1P0C6A0 271 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ALOX12P18054 663 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 KRT4P19013 534 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 TSPAN8P19075 237 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 CD22P20273 847 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 CCT5P48643 541 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 PIK3CGP48736 1102 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 CCNG1P51959 295 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 OLR1P78380 273 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 KLC1Q07866 573 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 ATP1A4Q13733 1029 aa10.51□□□□□ -0.73
LIG1-211ENST00000596457 DSG2Q14126 1118 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms