RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 RHBGQ9H310 441 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 ZNF282Q9UDV7 671 aaPredicted RBP24.48■■□□□ 1.51
TRIM28-204ENST00000594806 ADGRE2Q9UHX3 823 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 MAP4K5Q9Y4K4 846 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 MAU2Q9Y6X3 613 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 IGLV3-12A0A075B6K2 115 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 A8MT66 165 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 COPEO14579 308 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 SIX3O95343 332 aaPredicted RBP24.47■■□□□ 1.51
TRIM28-204ENST00000594806 SERPIND1P05546 499 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 ATP5F1P24539 256 aaPredicted RBP24.47■■□□□ 1.51
TRIM28-204ENST00000594806 FOLR3P41439 243 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 STXBP1P61764 594 aaKnown RBP24.47■■□□□ 1.51
TRIM28-204ENST00000594806 OCA2Q04671 838 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 ERV3-1Q14264 604 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 SSPNQ14714 243 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 GRHL2Q6ISB3 625 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 C16orf46Q6P387 395 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 GOLGA7Q7Z5G4 137 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 TRABD2AQ86V40 505 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.47■■□□□ 1.512e-7■■■■■ 91.6
TRIM28-204ENST00000594806 CCDC126Q96EE4 140 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 IP6K3Q96PC2 410 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 SLC6A16Q9GZN6 736 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 IPPKQ9H8X2 491 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 CLK4Q9HAZ1 481 aaKnown RBP24.47■■□□□ 1.51
TRIM28-204ENST00000594806 POLHQ9Y253 713 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 PTRH2Q9Y3E5 179 aaKnown RBP24.47■■□□□ 1.51
TRIM28-204ENST00000594806 TSC22D4Q9Y3Q8 395 aa24.47■■□□□ 1.51
TRIM28-204ENST00000594806 A0A0A6YYC8 382 aaPredicted RBP24.46■■□□□ 1.51
TRIM28-204ENST00000594806 VSTM2BA6NLU5 285 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 I3L1I5 382 aaPredicted RBP24.46■■□□□ 1.51
TRIM28-204ENST00000594806 RPS18P62269 152 aaKnown RBP24.46■■□□□ 1.51
TRIM28-204ENST00000594806 SLC9A5Q14940 896 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 NKG7Q16617 165 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 MED27Q6P2C8 311 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 LAS2Q8IYD9 372 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 IQCKQ8N0W5 287 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 AFAP1L2Q8N4X5 818 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 METTL27Q8N6F8 245 aaPredicted RBP24.46■■□□□ 1.51
TRIM28-204ENST00000594806 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.46■■□□□ 1.51
TRIM28-204ENST00000594806 MAGEB10Q96LZ2 347 aaPredicted RBP24.46■■□□□ 1.51
TRIM28-204ENST00000594806 MACROD1Q9BQ69 325 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 ACTR8Q9H981 624 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 MKKSQ9NPJ1 570 aaPredicted RBP24.46■■□□□ 1.51
TRIM28-204ENST00000594806 MKS1Q9NXB0 559 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 PCTPQ9UKL6 214 aa24.46■■□□□ 1.51
TRIM28-204ENST00000594806 ZNF490Q9ULM2 529 aaPredicted RBP24.46■■□□□ 1.51
TRIM28-204ENST00000594806 SCN3AQ9NY46 2000 aa24.45■■□□□ 1.51
TRIM28-204ENST00000594806 STATHP02808 62 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 RPS17P08708 135 aaKnown RBP24.45■■□□□ 1.5
TRIM28-204ENST00000594806 PRKAR1AP10644 381 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 ALOX12P18054 663 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 CD22P20273 847 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 NAA20P61599 178 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 HERVK_113P63132 956 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 RAB43Q86YS6 212 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 L3MBTL4Q8NA19 623 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 RDH11Q8TC12 318 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 REPS1Q96D71 796 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 MOCOSQ96EN8 888 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 NTMT1Q9BV86 223 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 ERVK-6Q9BXR3 956 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 TGIF2Q9GZN2 237 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 C14orf105Q9NVL8 296 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 SENP1Q9P0U3 644 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 MID2Q9UJV3 735 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 MRPS2Q9Y399 296 aaKnown RBP24.45■■□□□ 1.5
TRIM28-204ENST00000594806 PCDHGA11Q9Y5H2 935 aa24.45■■□□□ 1.5
TRIM28-204ENST00000594806 CDC14CA4D256 554 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 LRRC14BA6NHZ5 514 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 ERVH48-1M5A8F1 160 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 DLX3O60479 287 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 IGHEP01854 428 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 CYP4F2P78329 520 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 HYAL2Q12891 473 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 DTWD1Q8N5C7 304 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 AMER3Q8N944 861 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 OR9A4Q8NGU2 314 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 ZCCHC10Q8TBK6 192 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 STT3BQ8TCJ2 826 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 ADAMTS17Q8TE56 1095 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 UTP15Q8TED0 518 aaKnown RBP24.44■■□□□ 1.5
TRIM28-204ENST00000594806 ATP6V1E2Q96A05 226 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 MIEF2Q96C03 454 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 WBP1Q96G27 269 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 NOL11Q9H8H0 719 aaKnown RBP24.44■■□□□ 1.5
TRIM28-204ENST00000594806 TRPC4Q9UBN4 977 aa24.44■■□□□ 1.5
TRIM28-204ENST00000594806 FOXO6A8MYZ6 492 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 H0YIV9 168 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 CNOT3O75175 753 aaKnown RBP24.43■■□□□ 1.5
TRIM28-204ENST00000594806 CLDN9O95484 217 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 SMIM10L1P0DMW3 83 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 IL1RNP18510 177 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 IMPDH1P20839 514 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 IL10P22301 178 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 CCNG1P51959 295 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 PRKAA2P54646 552 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 ZNF844Q08AG5 666 aa24.43■■□□□ 1.5
TRIM28-204ENST00000594806 IL10RAQ13651 578 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms