RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 GOLGA8MH3BSY2 632 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 CDK2AP1O14519 115 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 SLC16A5O15375 505 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 C8GP07360 202 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 GABRB3P28472 473 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 CASP6P55212 293 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 SLC26A5P58743 744 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 USP10Q14694 798 aaKnown RBP14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 ABRAXAS2Q15018 415 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 NSDHLQ15738 373 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 PHKG1Q16816 387 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 HSP90AA5PQ58FG0 334 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 ZNF468Q5VIY5 522 aaPredicted RBP14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 RASGEF1CQ8N431 466 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 NAT8LQ8N9F0 302 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 C2CD4AQ8NCU7 369 aaPredicted RBP14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 TRIM58Q8NG06 486 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 OR5T3Q8NGG3 340 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 ELP5Q8TE02 316 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 TSLPQ969D9 159 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 LPAR4Q99677 370 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 TRIM51Q9BSJ1 452 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 ATG10Q9H0Y0 220 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 KLHL1Q9NR64 748 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 ANKRD10Q9NXR5 420 aa14.95□□□□□ -0.02
GTF2F1-203ENST00000594213 C2CD3Q4AC94 2353 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 GABRR3A8MPY1 467 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 C19orf84I3L1E1 186 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 TSPAN12O95859 305 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 SP1P08047 785 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 CDH1P12830 882 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 COX6B1P14854 86 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 ALDH6A1Q02252 535 aaKnown RBP14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 ACTN3Q08043 901 aaPredicted RBP14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 SP140Q13342 867 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 HERC3Q15034 1050 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 CYP1B1Q16678 543 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 SLC25A25Q6KCM7 469 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 LRRC8EQ6NSJ5 796 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 PAQR3Q6TCH7 311 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 ZNF227Q86WZ6 799 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 SLC5A8Q8N695 610 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 ACBD4Q8NC06 268 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 MAGOHBQ96A72 148 aaKnown RBP14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 PEX11GQ96HA9 241 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 TRIM45Q9H8W5 580 aaPredicted RBP14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 TRMT6Q9UJA5 497 aaKnown RBP14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 MEMO1Q9Y316 297 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 MTORP42345 2549 aa14.94□□□□□ -0.02
GTF2F1-203ENST00000594213 NCOA6Q14686 2063 aaPredicted RBP14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 ZNF860A6NHJ4 632 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 NPIPA5E9PKD4 350 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 FAM227AF5H4B4 570 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 ADAM10O14672 748 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 ASNA1O43681 348 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 GALR3O60755 368 aaPredicted RBP14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 FHP07954 510 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 SNRPB2P08579 225 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 CCDC175P0C221 793 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 CD46P15529 392 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 CCND1P24385 295 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 EEF1DP29692 281 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 KIR3DL1P43629 444 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 SMSP52788 366 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 CDKN2DP55273 166 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 OR4D2P58180 307 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 DHX9Q08211 1270 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 PWP1Q13610 501 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 RNFT1Q5M7Z0 435 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 UGT3A1Q6NUS8 523 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 GALNTL5Q7Z4T8 443 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 FGD2Q7Z6J4 655 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 STRA8Q7Z7C7 330 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 TMEM178AQ8NBL3 297 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 ZNF740Q8NDX6 193 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 OR56A3Q8NH54 315 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 TBC1D20Q96BZ9 403 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 MAGED4Q96JG8 741 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 OR4K3Q96R72 315 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 NDNQ99608 321 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 FAM167BQ9BTA0 163 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 RBCK1Q9BYM8 510 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 TSPAN10Q9H1Z9 355 aaPredicted RBP14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 CDCP1Q9H5V8 836 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 IARS2Q9NSE4 1012 aaKnown RBP14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 NPIPA1Q9UND3 350 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 MAD1L1Q9Y6D9 718 aa14.93□□□□□ -0.02
GTF2F1-203ENST00000594213 CHST10O43529 356 aa14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 CDC123O75794 336 aaPredicted RBP14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 CLDN14O95500 239 aa14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 MLYCDO95822 493 aa14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 B3GALT4O96024 378 aa14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 SLC35G6P0C7Q6 338 aa14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 ESRRAP11474 423 aaPredicted RBP14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 GRK3P35626 688 aa14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 RGS4P49798 205 aa14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 CCR8P51685 355 aa14.92□□□□□ -0.02
GTF2F1-203ENST00000594213 RBM20Q5T481 1227 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms