RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CYC1P08574 325 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 STSP08842 583 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 PRR35P0CG20 571 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 EDN3P14138 238 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 IL1RNP18510 177 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 GRK3P35626 688 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 EEF1A2Q05639 463 aaKnown RBP12.48□□□□□ -0.41
H3F3B-213ENST00000593254 FAAH2Q6GMR7 532 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 ISLR2Q6UXK2 745 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 STRA8Q7Z7C7 330 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 ASPGQ86U10 573 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 KBTBD2Q8IY47 623 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 ZBED8Q8IZ13 594 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 MFSD9Q8NBP5 474 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 KCT2Q8NC54 265 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 BBOF1Q8ND07 529 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 OR4K1Q8NGD4 311 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 SLC13A3Q8WWT9 602 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 ANKRD7Q92527 254 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 PSMF1Q92530 271 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 EPS8L2Q9H6S3 715 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 RIC8BQ9NVN3 520 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 MKL2Q9ULH7 1088 aa12.48□□□□□ -0.41
H3F3B-213ENST00000593254 NOVA2Q9UNW9 492 aaKnown RBP12.48□□□□□ -0.41
H3F3B-213ENST00000593254 MAP1AP78559 2803 aaPredicted RBP12.48□□□□□ -0.41
H3F3B-213ENST00000593254 FAM95CA0A1B0GW59 222 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 FAM187AA6NFU0 413 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 JRKO75564 520 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 KLHL18O94889 574 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 GUCA1CO95843 209 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 SERPINA7P05543 415 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 SLC35G6P0C7Q6 338 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 PTGER4P35408 488 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 SOX11P35716 441 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 TSFMP43897 325 aaKnown RBP12.47□□□□□ -0.41
H3F3B-213ENST00000593254 CCR8P51685 355 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 TAS2R39P59534 338 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 MRPS25P82663 173 aaKnown RBP12.47□□□□□ -0.41
H3F3B-213ENST00000593254 MFAP5Q13361 173 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 ART3Q13508 389 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 ZNF460Q14592 562 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 PCOLCEQ15113 449 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 RIPOR1Q6ZS17 1223 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 GDF7Q7Z4P5 450 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 SHISA5Q8N114 240 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 NKAPQ8N5F7 415 aaKnown RBP12.47□□□□□ -0.41
H3F3B-213ENST00000593254 SPATA4Q8NEY3 305 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 ZCCHC10Q8TBK6 192 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 DNAJB14Q8TBM8 379 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 NEIL2Q969S2 332 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 LMF1Q96S06 567 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 ERP44Q9BS26 406 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 KRTAP3-3Q9BYR6 98 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 KRTAP3-2Q9BYR7 98 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 VN1R1Q9GZP7 353 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 ZNF700Q9H0M5 742 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 RHOJQ9H4E5 214 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 NSMCE4AQ9NXX6 385 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 WHRNQ9P202 907 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 COPG2Q9UBF2 871 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 KLF2Q9Y5W3 355 aaPredicted RBP12.47□□□□□ -0.41
H3F3B-213ENST00000593254 SLC22A7Q9Y694 548 aa12.47□□□□□ -0.41
H3F3B-213ENST00000593254 ANKHD1Q8IWZ3 2542 aaKnown RBP12.47□□□□□ -0.41
H3F3B-213ENST00000593254 DNHD1Q96M86 4753 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 A0A1B0GUH1 482 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 TRBC2A0A5B9 178 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 SGK494L7N484 410 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 CDC7O00311 574 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 RAD51CO43502 376 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 C8orf89P0DMQ9 161 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 SAT1P21673 171 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 XCR1P46094 333 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 CDKL1Q00532 357 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 MEF2AQ02078 507 aaPredicted RBP12.46□□□□□ -0.41
H3F3B-213ENST00000593254 ILF2Q12905 390 aaKnown RBP12.46□□□□□ -0.41
H3F3B-213ENST00000593254 CALCOCO2Q13137 446 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 PWP1Q13610 501 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 ZNF169Q14929 603 aaPredicted RBP12.46□□□□□ -0.41
H3F3B-213ENST00000593254 TLR1Q15399 786 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 TESK1Q15569 626 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 CATSPEREQ5SY80 951 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 B3GNTL1Q67FW5 361 aaPredicted RBP12.46□□□□□ -0.41
H3F3B-213ENST00000593254 LINC00696Q6ZRV3 163 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 MAATS1Q7Z4T9 603 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 PDSS2Q86YH6 399 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 CEP97Q8IW35 865 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 AFAP1L2Q8N4X5 818 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 ZNF740Q8NDX6 193 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 OR51Q1Q8NH59 317 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 BRIX1Q8TDN6 353 aaKnown RBP12.46□□□□□ -0.41
H3F3B-213ENST00000593254 GRHL3Q8TE85 626 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 PYROXD1Q8WU10 500 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 FAR1Q8WVX9 515 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 SLC5A11Q8WWX8 675 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 VPS39Q96JC1 886 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 SLX1AQ9BQ83 275 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 TUBB6Q9BUF5 446 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 DPH5Q9H2P9 285 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 SPNS1Q9H2V7 528 aa12.46□□□□□ -0.41
H3F3B-213ENST00000593254 POPDC3Q9HBV1 291 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms