RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 SPIBQ01892 262 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 E2F2Q14209 437 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 CHRNA6Q15825 494 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 BAK1Q16611 211 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 EXOC3L2Q2M3D2 409 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 LYPLAL1Q5VWZ2 237 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 CHST9Q7L1S5 443 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 GPR151Q8TDV0 419 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 ASB15Q8WXK1 588 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 KCTD5Q9NXV2 234 aa17.32■□□□□ 0.36
SPC24-206ENST00000592540 FCF1Q9Y324 198 aaKnown RBP17.32■□□□□ 0.36
SPC24-206ENST00000592540 KRT87PA6NCN2 255 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 GJB5O95377 273 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 KLKB1P03952 638 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 TRAPPC2P0DI81 140 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 TRAPPC2BP0DI82 140 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 CBSLP0DN79 551 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 HLA-EP13747 358 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 AOAHP28039 575 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 CBSP35520 551 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 RPS19P39019 145 aaKnown RBP17.31■□□□□ 0.36
SPC24-206ENST00000592540 RGNQ15493 299 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 PTCHD3Q3KNS1 767 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 SNAP47Q5SQN1 464 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 GLB1LQ6UWU2 654 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 UBE2R2Q712K3 238 aaPredicted RBP17.31■□□□□ 0.36
SPC24-206ENST00000592540 RNF170Q96K19 258 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 DUSP26Q9BV47 211 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 CNPPD1Q9BV87 410 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 ASPNQ9BXN1 380 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 BARHL1Q9BZE3 327 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 GABRQQ9UN88 632 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 GLYATL1P3A0A0U1RQE8 302 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 C1orf226A1L170 272 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 SERTM1A2A2V5 107 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 MTMR11A4FU01 709 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 CLDN7O95471 211 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 VNN2O95498 520 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 OPN1SWP03999 348 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 BPIP17213 487 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 PTX3P26022 381 aaPredicted RBP17.31■□□□□ 0.36
SPC24-206ENST00000592540 OR1E2P47887 323 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 SLC6A12P48065 614 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.31■□□□□ 0.36
SPC24-206ENST00000592540 SLAMF1Q13291 335 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 ZNF79Q15937 498 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 LRRC66Q68CR7 880 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 RGMBQ6NW40 437 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 KRT73Q86Y46 540 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 NAGSQ8N159 534 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 OR9Q2Q8NGE9 314 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 WDR36Q8NI36 951 aaKnown RBP17.31■□□□□ 0.36
SPC24-206ENST00000592540 SLA2Q9H6Q3 261 aa17.31■□□□□ 0.36
SPC24-206ENST00000592540 CNOT2Q9NZN8 540 aaKnown RBP17.31■□□□□ 0.36
SPC24-206ENST00000592540 SYN3O14994 580 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 CCDC58Q4VC31 144 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 TMPRSS11AQ6ZMR5 421 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 C11orf65Q8NCR3 313 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 RASSF5Q8WWW0 418 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 PTPN18Q99952 460 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.3■□□□□ 0.36
SPC24-206ENST00000592540 EXOSC4Q9NPD3 245 aaKnown RBP17.3■□□□□ 0.36
SPC24-206ENST00000592540 CORO2BQ9UQ03 480 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 SLC22A14Q9Y267 594 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 SH3D21A4FU49 640 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 TFECO14948 347 aaPredicted RBP17.3■□□□□ 0.36
SPC24-206ENST00000592540 PCDH7O60245 1069 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 IL7P13232 177 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 CYP2A7P20853 494 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 AZGP1P25311 298 aaKnown RBP17.3■□□□□ 0.36
SPC24-206ENST00000592540 RPS5P46782 204 aaKnown RBP17.3■□□□□ 0.36
SPC24-206ENST00000592540 CDC42P60953 191 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 GALK2Q01415 458 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 PTGES3Q15185 160 aaKnown RBP17.3■□□□□ 0.36
SPC24-206ENST00000592540 TEAD4Q15561 434 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 FAM209AQ5JX71 171 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 PLAG1Q6DJT9 500 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 LAX1Q8IWV1 398 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 NXPE1Q8N323 547 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 OR6K2Q8NGY2 324 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 OPALINQ96PE5 141 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 COPS8Q99627 209 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 ZNF556Q9HAH1 456 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 OGDHLQ9ULD0 1010 aa17.3■□□□□ 0.36
SPC24-206ENST00000592540 TMA7Q9Y2S6 64 aaKnown RBP17.3■□□□□ 0.36
SPC24-206ENST00000592540 PLXNB3Q9ULL4 1909 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 LINC00854A0A1B0GVQ3 168 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 A8MVJ9 347 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 H3BM21 787 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 TPD52L2O43399 206 aaKnown RBP17.29■□□□□ 0.36
SPC24-206ENST00000592540 TRBC1P01850 177 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 POU2F1P14859 743 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 ATF6P18850 670 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 PPIBP23284 216 aaKnown RBP17.29■□□□□ 0.36
SPC24-206ENST00000592540 ITPKAP23677 461 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 CORO1AP31146 461 aaKnown RBP17.29■□□□□ 0.36
SPC24-206ENST00000592540 GNG2P59768 71 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 SMARCB1Q12824 385 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 DUSP4Q13115 394 aa17.29■□□□□ 0.36
SPC24-206ENST00000592540 GAB1Q13480 694 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms