RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 VNN3Q9NY84 501 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 RPS6KA6Q9UK32 745 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 CFAP20Q9Y6A4 193 aaKnown RBP18.92■□□□□ 0.62
MBD3-209ENST00000592012 CKAP5Q14008 2032 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 APODP05090 189 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 ABCB1P08183 1280 aaPredicted RBP18.92■□□□□ 0.62
MBD3-209ENST00000592012 FURINP09958 794 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 PPIBP23284 216 aaKnown RBP18.92■□□□□ 0.62
MBD3-209ENST00000592012 PIGAP37287 484 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 MC1RQ01726 317 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 CAMK2GQ13555 558 aaPredicted RBP18.92■□□□□ 0.62
MBD3-209ENST00000592012 CBLL1Q75N03 491 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 HIPK1Q86Z02 1210 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 ALDH16A1Q8IZ83 802 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 GOT1L1Q8NHS2 421 aaPredicted RBP18.92■□□□□ 0.62
MBD3-209ENST00000592012 C16orf78Q8WTQ4 265 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 SPATA9Q9BWV2 254 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 TEX101Q9BY14 249 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 ZNF282Q9UDV7 671 aaPredicted RBP18.92■□□□□ 0.62
MBD3-209ENST00000592012 VPS4AQ9UN37 437 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 ABCG2Q9UNQ0 655 aa18.92■□□□□ 0.62
MBD3-209ENST00000592012 DNMT3AQ9Y6K1 912 aaPredicted RBP18.92■□□□□ 0.62
MBD3-209ENST00000592012 ELK4P28324 431 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 SLC5A2P31639 672 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 HBA1P69905 142 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 PDE7AQ13946 482 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 AGERQ15109 404 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 EIF3MQ7L2H7 374 aaKnown RBP18.91■□□□□ 0.62
MBD3-209ENST00000592012 VTCN1Q7Z7D3 282 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 OR4A15Q8NGL6 344 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 MPP4Q96JB8 637 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 RSL24D1Q9UHA3 163 aaKnown RBP18.91■□□□□ 0.62
MBD3-209ENST00000592012 TMEFF2Q9UIK5 374 aaPredicted RBP18.91■□□□□ 0.62
MBD3-209ENST00000592012 CORO2BQ9UQ03 480 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 LINC01565O15544 149 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 NTRK1P04629 796 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 KLK1P06870 262 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 PTX3P26022 381 aaPredicted RBP18.91■□□□□ 0.62
MBD3-209ENST00000592012 GDI1P31150 447 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 YAP1P46937 504 aaKnown RBP18.91■□□□□ 0.62
MBD3-209ENST00000592012 SH3BGRP55822 239 aaPredicted RBP18.91■□□□□ 0.62
MBD3-209ENST00000592012 KCNAB2Q13303 367 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 ARHGAP19Q14CB8 494 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 FAM71E1Q6IPT2 247 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 SHQ1Q6PI26 577 aaKnown RBP18.91■□□□□ 0.62
MBD3-209ENST00000592012 PARM1Q6UWI2 310 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 THAP5Q7Z6K1 395 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 DCP2Q8IU60 420 aaKnown RBP18.91■□□□□ 0.62
MBD3-209ENST00000592012 HDDC3Q8N4P3 179 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 FGF14Q92915 247 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 MENTQ9BUN1 341 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 MYNNQ9NPC7 610 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 GPATCH2Q9NW75 528 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 IFT80Q9P2H3 777 aaPredicted RBP18.91■□□□□ 0.62
MBD3-209ENST00000592012 OR1A2Q9Y585 309 aa18.91■□□□□ 0.62
MBD3-209ENST00000592012 HS6ST1O60243 411 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 PCSK6P29122 969 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 TRIM23P36406 574 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 HLCSP50747 726 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 CDK9P50750 372 aaKnown RBP18.9■□□□□ 0.62
MBD3-209ENST00000592012 CRYBA2P53672 197 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 TAS2R50P59544 299 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 VLDLRP98155 873 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 C2orf80Q0P641 193 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 BIRC2Q13490 618 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 MPEG1Q2M385 716 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.9■□□□□ 0.62
MBD3-209ENST00000592012 OR2T5Q6IEZ7 315 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 NUDT18Q6ZVK8 323 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 R3HCC1LQ7Z5L2 792 aaKnown RBP18.9■□□□□ 0.62
MBD3-209ENST00000592012 NAGSQ8N159 534 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 ZNF513Q8N8E2 541 aaPredicted RBP18.9■□□□□ 0.62
MBD3-209ENST00000592012 ARL10Q8N8L6 244 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 OR2T29Q8NH02 315 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 MAL2Q969L2 176 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 RPP25Q9BUL9 199 aaKnown RBP18.9■□□□□ 0.62
MBD3-209ENST00000592012 NPLQ9BXD5 320 aaPredicted RBP18.9■□□□□ 0.62
MBD3-209ENST00000592012 ATAD3AQ9NVI7 634 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 C3orf18Q9UK00 162 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 PCDHGA8Q9Y5G5 932 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 A0A1W2PP55 124 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 TBX6O95947 436 aaPredicted RBP18.9■□□□□ 0.62
MBD3-209ENST00000592012 PAK4O96013 591 aaPredicted RBP18.9■□□□□ 0.62
MBD3-209ENST00000592012 C5AR1P21730 350 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 MVDP53602 400 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 ESRRGP62508 458 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 PHEXP78562 749 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 FGL2Q14314 439 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 ZBED5Q49AG3 693 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 TMEM184AQ6ZMB5 413 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 C8orf59Q8N0T1 100 aaPredicted RBP18.9■□□□□ 0.62
MBD3-209ENST00000592012 KRT78Q8N1N4 520 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 ZNF555Q8NEP9 628 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 ING2Q9H160 280 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 TM9SF3Q9HD45 589 aa18.9■□□□□ 0.62
MBD3-209ENST00000592012 KMOO15229 486 aa18.89■□□□□ 0.61
MBD3-209ENST00000592012 B4GAT1O43505 415 aa18.89■□□□□ 0.61
MBD3-209ENST00000592012 ADH1BP00325 375 aa18.89■□□□□ 0.61
MBD3-209ENST00000592012 RPN2P04844 631 aa18.89■□□□□ 0.61
MBD3-209ENST00000592012 F5P12259 2224 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms