RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RPS26P11Q5JNZ5 115 aaPredicted RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 FAM69BQ5VUD6 431 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 GARNL3Q5VVW2 1013 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 PRMT9Q6P2P2 845 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 C1orf229Q6ZS94 237 aaPredicted RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 TAOK1Q7L7X3 1001 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 OVCH1Q7RTY7 1134 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 VN1R5Q7Z5H4 357 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 CCDC91Q7Z6B0 441 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 CMC1Q7Z7K0 106 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 THOC6Q86W42 341 aaKnown RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 GPSM1Q86YR5 675 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 RAB43Q86YS6 212 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 TCAIMQ8N3R3 496 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 EXD3Q8N9H8 876 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 FKBP10Q96AY3 582 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 UBXN10Q96LJ8 280 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 TSNARE1Q96NA8 513 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 OR4K3Q96R72 315 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 VIPAS39Q9H9C1 493 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 NMRAL1Q9HBL8 299 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 ZNF304Q9HCX3 659 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 GEMIN8Q9NWZ8 242 aaKnown RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 CD274Q9NZQ7 290 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 TLK1Q9UKI8 766 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 RNF112Q9ULX5 631 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 CDC14AQ9UNH5 594 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 RUVBL1Q9Y265 456 aaKnown RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 ACOT9Q9Y305 439 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 MAU2Q9Y6X3 613 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 A0A087X1B8 175 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 FEZF1A0PJY2 475 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 RFPL1O75677 317 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 KLF7O75840 302 aaPredicted RBP9.86□□□□□ -0.83
SDF2-208ENST00000589788 WDR47O94967 919 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 ALBP02768 609 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 STATHP02808 62 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 INHBAP08476 426 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 LTA4HP09960 611 aaKnown RBP9.86□□□□□ -0.83
SDF2-208ENST00000589788 SLC35E2BP0CK96 405 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 CD1DP15813 335 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 ITGAXP20702 1163 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 FBLP22087 321 aaKnown RBP9.86□□□□□ -0.83
SDF2-208ENST00000589788 SLC26A3P40879 764 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 OCA2Q04671 838 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 SRSF11Q05519 484 aaKnown RBP9.86□□□□□ -0.83
SDF2-208ENST00000589788 C19orf57Q0VDD7 668 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 SSPNQ14714 243 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 TGFBIQ15582 683 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 OR4D1Q15615 310 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 ZXDCQ2QGD7 858 aaPredicted RBP9.86□□□□□ -0.83
SDF2-208ENST00000589788 HKDC1Q2TB90 917 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 IQCKQ8N0W5 287 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 GOLGA6L1Q8N7Z2 621 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 ABHD11Q8NFV4 315 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 OR2Y1Q8NGV0 311 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.86□□□□□ -0.83
SDF2-208ENST00000589788 SLC5A11Q8WWX8 675 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 SREK1Q8WXA9 508 aaKnown RBP9.86□□□□□ -0.83
SDF2-208ENST00000589788 EXT2Q93063 718 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 NEIL2Q969S2 332 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 KIAA1191Q96A73 305 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 PTERQ96BW5 349 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 RHBDF1Q96CC6 855 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 C10orf90Q96M02 699 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 YIPF2Q9BWQ6 316 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 SEMA4CQ9C0C4 833 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 ADAM19Q9H013 955 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 DRC3Q9H069 523 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 WDR54Q9H977 334 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 CNOT10Q9H9A5 744 aaKnown RBP9.86□□□□□ -0.83
SDF2-208ENST00000589788 SLC22A11Q9NSA0 550 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 ZNF446Q9NWS9 450 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 WWOXQ9NZC7 414 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 FETUBQ9UGM5 382 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 TUBD1Q9UJT1 453 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 NXT1Q9UKK6 140 aaKnown RBP9.86□□□□□ -0.83
SDF2-208ENST00000589788 SLC22A14Q9Y267 594 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 KCNE2Q9Y6J6 123 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 ATRXP46100 2492 aa9.86□□□□□ -0.83
SDF2-208ENST00000589788 PIEZO2Q9H5I5 2752 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 KCNE1BA0A087WTH5 132 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 TRBC2A0A5B9 178 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 ARGFXA6NJG6 315 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 SUPT3HB4E1H0 165 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 POC1B-GALNT4F8VUJ3 575 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 MKRN2OSH3BPM6 223 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 PEX12O00623 359 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 MAP2K7O14733 419 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 P2RX6O15547 441 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 ATP8B1O43520 1251 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 OR1F1O43749 312 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 SUPT3HO75486 399 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 IPO13O94829 963 aaKnown RBP9.85□□□□□ -0.83
SDF2-208ENST00000589788 MED26O95402 600 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 ONECUT2O95948 504 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 SLC35G6P0C7Q6 338 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 EPXP11678 715 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 GNAZP19086 355 aa9.85□□□□□ -0.83
SDF2-208ENST00000589788 TFEBP19484 476 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms