RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 OR1D5P58170 312 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 MXRA7P84157 204 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 RELAQ04206 551 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 PTGR1Q14914 329 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 EID2Q8N6I1 236 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 CREB3L4Q8TEY5 395 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 FCRL1Q96LA6 429 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 F2RL3Q96RI0 385 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 ZBTB18Q99592 522 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 SLC25A23Q9BV35 468 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 EBPLQ9BY08 206 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 BAIAP2L1Q9UHR4 511 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 CAPN5O15484 640 aaPredicted RBP21.27■■□□□ 1
ATG4D-209ENST00000588857 SEMA3DO95025 777 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 CD1EP15812 388 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 SDC1P18827 310 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 STX5Q13190 355 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 FBXO42Q6P3S6 717 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 COMMD6Q7Z4G1 85 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 FUNDC1Q8IVP5 155 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 METTL4Q8N3J2 472 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 MINDY1Q8N5J2 469 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 FAM181AQ8N9Y4 354 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 PROKR1Q8TCW9 393 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 NCSTNQ92542 709 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 THAP11Q96EK4 314 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 ZDHHC12Q96GR4 267 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 DPY30Q9C005 99 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 RAB33BQ9H082 229 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 SIRT5Q9NXA8 310 aa21.27■■□□□ 1
ATG4D-209ENST00000588857 IGHV1OR21-1A0A087WYE8 117 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 FAM234BA2RU67 622 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 NR5A2O00482 541 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 NDUFS4O43181 175 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 DUX1O43812 170 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 ANXA4P09525 319 aaPredicted RBP21.27■□□□□ 0.99
ATG4D-209ENST00000588857 JAK1P23458 1154 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 PTPN4P29074 926 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 POLR2JP52435 117 aaKnown RBP21.27■□□□□ 0.99
ATG4D-209ENST00000588857 KCNK10P57789 538 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 GPLD1P80108 840 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 NR1D2Q14995 579 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 SF3A2Q15428 464 aaKnown RBP21.27■□□□□ 0.99
ATG4D-209ENST00000588857 ZIC1Q15915 447 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 TMEM35AQ53FP2 167 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 NKAIN2Q5VXU1 208 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 GALNT18Q6P9A2 607 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 FAM92BQ6ZTR7 304 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 Q8N9G6 341 aaPredicted RBP21.27■□□□□ 0.99
ATG4D-209ENST00000588857 KLHL29Q96CT2 875 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 C11orf24Q96F05 449 aaPredicted RBP21.27■□□□□ 0.99
ATG4D-209ENST00000588857 TEX37Q96LM6 180 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 ZFYVE21Q9BQ24 234 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 RTKNQ9BST9 563 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 ZMYND15Q9H091 742 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 C1GALT1Q9NS00 363 aa21.27■□□□□ 0.99
ATG4D-209ENST00000588857 UNC13CQ8NB66 2214 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 RP1P56715 2156 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 A0A0J9YVX5 310 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 GNG14A0A1W2PPG7 69 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 ANKRD65E5RJM6 399 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 PCDH7O60245 1069 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 CTSVO60911 334 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 TBX6O95947 436 aaPredicted RBP21.26■□□□□ 0.99
ATG4D-209ENST00000588857 TIA1P31483 386 aaKnown RBP eCLIP21.26■□□□□ 0.99
ATG4D-209ENST00000588857 ID4P47928 161 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 MMEL1Q495T6 779 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 TCEAL6Q6IPX3 200 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 BLOC1S3Q6QNY0 202 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 RINLQ6ZS11 566 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 CLHC1Q8NHS4 586 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 SLC13A3Q8WWT9 602 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 TCEAL3Q969E4 200 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 RERGQ96A58 199 aaPredicted RBP21.26■□□□□ 0.99
ATG4D-209ENST00000588857 CCDC74AQ96AQ1 378 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 RGMAQ96B86 450 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 SLC7A6OSQ96CW6 309 aaPredicted RBP21.26■□□□□ 0.99
ATG4D-209ENST00000588857 TGM7Q96PF1 710 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 TSSK3Q96PN8 268 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 TRAPPC9Q96Q05 1148 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 REXO4Q9GZR2 422 aaKnown RBP21.26■□□□□ 0.99
ATG4D-209ENST00000588857 LRMDAQ9H2I8 198 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 ACTL8Q9H568 366 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 EPHA6Q9UF33 1036 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 PILRAQ9UKJ1 303 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 ASXL3Q9C0F0 2248 aa21.26■□□□□ 0.99
ATG4D-209ENST00000588857 CPED1A4D0V7 1026 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 LRIT2A6NDA9 550 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 C9JVG2 144 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 AIM2O14862 343 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 ANKRD28O15084 1053 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 ST6GAL1P15907 406 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 PNLIPP16233 465 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 TACR1P25103 407 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 CLDN8P56748 225 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 RAE1P78406 368 aaKnown RBP21.25■□□□□ 0.99
ATG4D-209ENST00000588857 RSPO4Q2I0M5 234 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-209ENST00000588857 AMZ1Q400G9 498 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 PAGE2Q7Z2X7 111 aa21.25■□□□□ 0.99
ATG4D-209ENST00000588857 ASPGQ86U10 573 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms