RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 PLCL2Q9UPR0 1127 aa21.61■■□□□ 1.05
ACTN4-210ENST00000588618 SERTM1A2A2V5 107 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 SRPX2O60687 465 aaPredicted RBP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 SH3BGRLO75368 114 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 TRA2AQ13595 282 aaKnown RBP eCLIP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 LSM12Q3MHD2 195 aaKnown RBP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 GALNTL6Q49A17 601 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 FRMPD2BQ6IN97 320 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 LARP4Q71RC2 724 aaKnown RBP eCLIP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 VN1R4Q7Z5H5 301 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 MCATQ8IVS2 390 aaKnown RBP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 D2HGDHQ8N465 521 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 PPP3R2Q96LZ3 170 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 H0YGG7 62 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 RSL1D1O76021 490 aaKnown RBP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 PRR35P0CG20 571 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 VSX2P58304 361 aaPredicted RBP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 ARF3P61204 181 aaPredicted RBP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 STXBP1P61764 594 aaKnown RBP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 PWP1Q13610 501 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 ARHGAP22Q7Z5H3 698 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 ALYREFQ86V81 257 aaKnown RBP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 SLITRK4Q8IW52 837 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 DNAJC22Q8N4W6 341 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 CEP70Q8NHQ1 597 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 CREB3L4Q8TEY5 395 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 MACROD1Q9BQ69 325 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 AICDAQ9GZX7 198 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 OR51B5Q9H339 312 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.6■■□□□ 1.05
ACTN4-210ENST00000588618 PPT2Q9UMR5 302 aa21.6■■□□□ 1.05
ACTN4-210ENST00000588618 LOC105369274A0A096LPK9 316 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 LOC102723532A0A0G2JNH3 316 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 URADA6NGE7 173 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 TXNDC9O14530 226 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 LSM1O15116 133 aaKnown RBP21.59■■□□□ 1.05
ACTN4-210ENST00000588618 PEX11AO75192 247 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 SERPINA6P08185 405 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 CSRP1P21291 193 aaKnown RBP21.59■■□□□ 1.05
ACTN4-210ENST00000588618 CSTF2P33240 577 aaKnown RBP eCLIP21.59■■□□□ 1.05
ACTN4-210ENST00000588618 RAP1GDS1P52306 607 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 KCNAB1Q14722 419 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 TMEM198Q66K66 360 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 OR4N4Q8N0Y3 316 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 CSNK1A1LQ8N752 337 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 MS4A8Q9BY19 250 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 REXO4Q9GZR2 422 aaKnown RBP21.59■■□□□ 1.05
ACTN4-210ENST00000588618 AHSPQ9NZD4 102 aa21.59■■□□□ 1.05
ACTN4-210ENST00000588618 AKAP7Q9P0M2 348 aaPredicted RBP21.59■■□□□ 1.05
ACTN4-210ENST00000588618 CDV3Q9UKY7 258 aaKnown RBP21.59■■□□□ 1.05
ACTN4-210ENST00000588618 ZSCAN9O15535 394 aaPredicted RBP21.58■■□□□ 1.05
ACTN4-210ENST00000588618 SEC22BO75396 215 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 CTSBP07858 339 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 CUL3Q13618 768 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 AP5B1Q2VPB7 878 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 KHDRBS2Q5VWX1 349 aaKnown RBP21.58■■□□□ 1.05
ACTN4-210ENST00000588618 ANKS4BQ8N8V4 417 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 FNDC5Q8NAU1 212 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 ACTRT2Q8TDY3 377 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 STON2Q8WXE9 905 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 LRTM1Q9HBL6 345 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 C1orf109Q9NX04 203 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 ARL2BPQ9Y2Y0 163 aa21.58■■□□□ 1.05
ACTN4-210ENST00000588618 E9PBE3 544 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 KLHL41O60662 606 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 LBPP18428 481 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 ACY1Q03154 408 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 TGM3Q08188 693 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 HYAL2Q12891 473 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 TCTE1Q5JU00 501 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 CCDC28BQ9BUN5 200 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 TOR4AQ9NXH8 423 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 TRIM33Q9UPN9 1127 aa21.58■■□□□ 1.04
ACTN4-210ENST00000588618 CEP250Q9BV73 2442 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 LRIT2A6NDA9 550 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 TMEM150CB9EJG8 249 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 TMX2-CTNND1H3BSU7 103 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 AGRPO00253 132 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 SAP18O00422 153 aaKnown RBP21.57■■□□□ 1.04
ACTN4-210ENST00000588618 ALDOCP09972 364 aaKnown RBP21.57■■□□□ 1.04
ACTN4-210ENST00000588618 GABRA4P48169 554 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 SNRPNP63162 240 aaKnown RBP21.57■■□□□ 1.04
ACTN4-210ENST00000588618 INSM1Q01101 510 aaPredicted RBP21.57■■□□□ 1.04
ACTN4-210ENST00000588618 ZFP36L1Q07352 338 aaKnown RBP21.57■■□□□ 1.04
ACTN4-210ENST00000588618 ACSM2AQ08AH3 577 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 MAD2L1Q13257 205 aaPredicted RBP21.57■■□□□ 1.04
ACTN4-210ENST00000588618 TMEM35AQ53FP2 167 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 SPIN4Q56A73 249 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 WASHC2DQ5SRD0 308 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 MANEAQ5SRI9 462 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 DEPDC1Q5TB30 811 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 ACSM2BQ68CK6 577 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 TRIM40Q6P9F5 258 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 CYB5D1Q6P9G0 228 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 DHRS13Q6UX07 377 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 DGLUCYQ7Z3D6 616 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 B3GNT8Q7Z7M8 397 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 GPR135Q8IZ08 494 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 CCDC197Q8NCU1 140 aa21.57■■□□□ 1.04
ACTN4-210ENST00000588618 AGBL5Q8NDL9 886 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms