RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 SRPK3Q9UPE1 567 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 RUVBL1Q9Y265 456 aaKnown RBP12.99□□□□□ -0.33
VMP1-203ENST00000586245 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.99□□□□□ -0.33
VMP1-203ENST00000586245 FIS1Q9Y3D6 152 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 RAP2CQ9Y3L5 183 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 TRAF6Q9Y4K3 522 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 NEUROG3Q9Y4Z2 214 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 PCDHB3Q9Y5E6 796 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 PCDHGA3Q9Y5H0 932 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 B3GALT1Q9Y5Z6 326 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 AK5Q9Y6K8 562 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 HYKKA2RU49 373 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 H3BMH7 237 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 P2RX6O15547 441 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 SNNO75324 88 aaPredicted RBP12.98□□□□□ -0.33
VMP1-203ENST00000586245 TGFB1P01137 390 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 PDYNP01213 254 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 FGF4P08620 206 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 NEK2P51955 445 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 EMP3P54852 163 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 FOXA1P55317 472 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 ZNF33BQ06732 778 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 CAMK2BQ13554 666 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 RTP5Q14D33 572 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 MUM1Q2TAK8 710 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 TOR1AIP1Q5JTV8 583 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 YOD1Q5VVQ6 348 aaPredicted RBP12.98□□□□□ -0.33
VMP1-203ENST00000586245 CLEC6AQ6EIG7 209 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 ADNP2Q6IQ32 1131 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 IGF2-ASQ6U949 168 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 CHSY3Q70JA7 882 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 VN1R5Q7Z5H4 357 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 SLC46A1Q96NT5 459 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 MACROD1Q9BQ69 325 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 ULBP3Q9BZM4 244 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 SLC6A16Q9GZN6 736 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 C20orf27Q9GZN8 174 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 ZNF395Q9H8N7 513 aaPredicted RBP12.98□□□□□ -0.33
VMP1-203ENST00000586245 ACTR5Q9H9F9 607 aaPredicted RBP12.98□□□□□ -0.33
VMP1-203ENST00000586245 TNFRSF12AQ9NP84 129 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 ENAMQ9NRM1 1142 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 CUTCQ9NTM9 273 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 PSD3Q9NYI0 1048 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 ZDHHC2Q9UIJ5 367 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 WASF3Q9UPY6 502 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 MSRB2Q9Y3D2 182 aa12.98□□□□□ -0.33
VMP1-203ENST00000586245 TRABD2BA6NFA1 517 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 MAGEB17A8MXT2 336 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 C9orf172C9J069 976 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 NVLO15381 856 aaKnown RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 CPNE3O75131 537 aaKnown RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 KIAA0754O94854 1291 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 TIAF1O95411 115 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 HSD3B1P14060 373 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 ALAS2P22557 587 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 PTX3P26022 381 aaPredicted RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 HSD3B2P26439 372 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 SERPINB3P29508 390 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 HTR6P50406 440 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 RPL14P50914 215 aaKnown RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 RAP1GDS1P52306 607 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 RPS13P62277 151 aaKnown RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 OCRLQ01968 901 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 TGM3Q08188 693 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 CSTF3Q12996 717 aaKnown RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 IMPG1Q17R60 797 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 TMEM35AQ53FP2 167 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 TCHHL1Q5QJ38 904 aaPredicted RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 PRAMEF17Q5VTA0 474 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 KANK2Q63ZY3 851 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 TMEM214Q6NUQ4 689 aaKnown RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 TTLL10Q6ZVT0 673 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 ABHD13Q7L211 337 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 CRLF3Q8IUI8 442 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 RNF175Q8N4F7 328 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 ZNF781Q8N8C0 355 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 GBP7Q8N8V2 638 aaPredicted RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 KCT2Q8NC54 265 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 SRFBP1Q8NEF9 429 aaKnown RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 ZCCHC10Q8TBK6 192 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 PMEPA1Q969W9 287 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 SORT1Q99523 831 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 SERPINI1Q99574 410 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 MS4A8Q9BY19 250 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 REXO4Q9GZR2 422 aaKnown RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 BRF2Q9HAW0 419 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 PFDN4Q9NQP4 134 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 THSD1Q9NS62 852 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 FARSBQ9NSD9 589 aaKnown RBP12.97□□□□□ -0.33
VMP1-203ENST00000586245 NMRK1Q9NWW6 199 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 NDOR1Q9UHB4 597 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 PCDHGA7Q9Y5G6 932 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 DCHS1Q96JQ0 3298 aa12.97□□□□□ -0.33
VMP1-203ENST00000586245 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.33
VMP1-203ENST00000586245 A0A088AWK7 358 aa12.96□□□□□ -0.33
VMP1-203ENST00000586245 LRIT2A6NDA9 550 aa12.96□□□□□ -0.33
VMP1-203ENST00000586245 TMEM233B4DJY2 109 aa12.96□□□□□ -0.33
VMP1-203ENST00000586245 DSCR3O14972 297 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms