RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SGK494L7N484 410 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 KLHL18O94889 574 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 IGHEP01854 428 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 TNFRSF8P28908 595 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 HNF4AP41235 474 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 MAGEA12P43365 314 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 PFKFB4Q16877 469 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 LACTB2Q53H82 288 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 TECRLQ5HYJ1 363 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 TMIGD1Q6UXZ0 262 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 CLEC1AQ8NC01 280 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 NT5CQ8TCD5 201 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 CCT6BQ92526 530 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 CCDC77Q9BR77 488 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 ANKZF1Q9H8Y5 726 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 C14orf105Q9NVL8 296 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 ZNF358Q9NW07 568 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 HCN3Q9P1Z3 774 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 G3BP2Q9UN86 482 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 TP53TG5Q9Y2B4 290 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 NAALAD2Q9Y3Q0 740 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 ASB1Q9Y576 335 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 ANGPTL3Q9Y5C1 460 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 SLC22A7Q9Y694 548 aa11.95□□□□□ -0.5
SMARCE1-218ENST00000582955 PCSK5Q92824 1860 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 IQANK1A0A1B0GTG1 560 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 URADA6NGE7 173 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 ZNF860A6NHJ4 632 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 ANKDD1BA6NHY2 528 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 AGPSO00116 658 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 MAP2K7O14733 419 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 RDH16O75452 317 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 SLU7O95391 586 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 HEXBP07686 556 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 RBP1P09455 135 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 ZNF888P0CJ79 500 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 MTHFD2P13995 350 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 ALOX12P18054 663 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 NR1D1P20393 614 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 GCAP28676 217 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 EMP2P54851 167 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 SKP1P63208 163 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 IRF8Q02556 426 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 CHIT1Q13231 466 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 RAPSNQ13702 412 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 DOC2AQ14183 400 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 HERC3Q15034 1050 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 SETDB1Q15047 1291 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 TSNAXIP1Q2TAA8 658 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 DEFB134Q4QY38 66 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 PAGE2BQ5JRK9 111 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 TOR1AIP1Q5JTV8 583 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 MFSD4BQ5TF39 518 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 FAAH2Q6GMR7 532 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 ADGRD1Q6QNK2 874 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 ABHD13Q7L211 337 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 LAPTM4BQ86VI4 370 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 PTRH1Q86Y79 214 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 PDSS2Q86YH6 399 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 ZC3H7AQ8IWR0 971 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 TEX9Q8N6V9 391 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 TTLQ8NG68 377 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 OR51Q1Q8NH59 317 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 UBTD2Q8WUN7 234 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 NACC2Q96BF6 587 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 MTBPQ96DY7 904 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 PTCD3Q96EY7 689 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 VPS50Q96JG6 964 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 GPR78Q96P69 363 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 EFCAB11Q9BUY7 163 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 SLC25A23Q9BV35 468 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 EPB41L4BQ9H329 900 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 EHD1Q9H4M9 534 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 PSMC3IPQ9P2W1 217 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 XPR1Q9UBH6 696 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 FBXL4Q9UKA2 621 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 HEMK1Q9Y5R4 338 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 HS3ST3B1Q9Y662 390 aa11.94□□□□□ -0.5
SMARCE1-218ENST00000582955 KALRNO60229 2985 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 IDSB3KWA1 339 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 B8ZZF3 427 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 K7EM74 188 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 MASP2O00187 686 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 SOCS6O14544 535 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 PRAMEF4O60810 478 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 ALOX12BO75342 701 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 B3GALT4O96024 378 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 SERPINA6P08185 405 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 COL6A2P12110 1019 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 ACPPP15309 386 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 EPB42P16452 691 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 EPORP19235 508 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 XCR1P46094 333 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 PGDP52209 483 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 ALDH18A1P54886 795 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 RAB8AP61006 207 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 LAPTM5Q13571 262 aa11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 NAA30Q147X3 362 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-218ENST00000582955 HIST2H2ACQ16777 129 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms