RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	PIGV	Q9NUD9	493 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	ASNSD1	Q9NWL6	643 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	IRAK4	Q9NWZ3	460 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	SPHK1	Q9NYA1	384 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	CGN	Q9P2M7	1197 aa	Known RBP	4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	TES	Q9UGI8	421 aa	Known RBP	4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	DNAI1	Q9UI46	699 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	MID2	Q9UJV3	735 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	PRDM4	Q9UKN5	801 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	NEU3	Q9UQ49	428 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	CTNND2	Q9UQB3	1225 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	DRG1	Q9Y295	367 aa	Known RBP	4.48	□□□□□ -1.69
MSI2-216	ENST00000582772	GRIP1	Q9Y3R0	1128 aa		4.48	□□□□□ -1.69
MSI2-216	ENST00000582772		A0A0G2JMM0	328 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772		A0A0J9YY10	115 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772		A0A1W2PPB8	328 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772		A0A1W2PRS3	328 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	SOWAHD	A6NJG2	315 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	ARHGEF33	A8MVX0	844 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	KIR3DP1	A8MWS1	328 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	MED26	O95402	600 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	BMP15	O95972	392 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	CP	P00450	1065 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	POU2F1	P14859	743 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	RHOQ	P17081	205 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	ADRA2C	P18825	462 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	CDK11B	P21127	795 aa	Known RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	APEX1	P27695	318 aa	Known RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	BCL6	P41182	706 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	ACADSB	P45954	432 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	AGTR2	P50052	363 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	PMS1	P54277	932 aa	Known RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	XRCC4	Q13426	336 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	KRT31	Q15323	416 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	ERCC6L	Q2NKX8	1250 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	GLIPR1L2	Q4G1C9	344 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	NKAPL	Q5M9Q1	402 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	RRAGB	Q5VZM2	374 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	FAM111B	Q6SJ93	734 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	RBMS3	Q6XE24	437 aa	Known RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	THSD4	Q6ZMP0	1018 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	GPALPP1	Q8IXQ4	340 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	DTWD1	Q8N5C7	304 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	METTL27	Q8N6F8	245 aa	Predicted RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	TTC29	Q8NA56	475 aa	Predicted RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	PHC3	Q8NDX5	983 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	STK32A	Q8WU08	396 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	TMEM174	Q8WUU8	243 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	DVL3	Q92997	716 aa	Predicted RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	KCTD12	Q96CX2	325 aa	Known RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	MVB12A	Q96EY5	273 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	FAM111A	Q96PZ2	611 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	PANX2	Q96RD6	677 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	TM9SF2	Q99805	663 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	BAG1	Q99933	345 aa	Predicted RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	FAM173A	Q9BQD7	235 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	SLC39A3	Q9BRY0	314 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	CARD6	Q9BX69	1037 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	BPESC1	Q9GZL8	116 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	KLC2	Q9H0B6	622 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	TFB2M	Q9H5Q4	396 aa	Known RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	WDCP	Q9H6R7	721 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	MMRN2	Q9H8L6	949 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	QPCTL	Q9NXS2	382 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	TAB2	Q9NYJ8	693 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	ACTR10	Q9NZ32	417 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	TRIM10	Q9UDY6	481 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	LIMA1	Q9UHB6	759 aa	Known RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	HOOK1	Q9UJC3	728 aa	Known RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	SNX10	Q9Y5X0	201 aa		4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	4.47	□□□□□ -1.69
MSI2-216	ENST00000582772	PKD1	P98161	4303 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	SYNJ2BP-COX16	A0A087WUM0	186 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	IGHV3-20	A0A0C4DH32	117 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	ATP6AP2	A0A1C7CYW4	349 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	LRP5L	A4QPB2	252 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	LRRC10B	A6NIK2	292 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	PRPF4	O43172	522 aa	Known RBP eCLIP	4.46	□□□□□ -1.7	3e-6	■■□□□ 14.3
MSI2-216	ENST00000582772	STX10	O60499	249 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	LILRA1	O75019	489 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	MFAP3L	O75121	409 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	ATP6AP2	O75787	350 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	URI1	O94763	535 aa	Predicted RBP	4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	PNP	P00491	289 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	GYPC	P04921	128 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	CRH	P06850	196 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	FPR2	P25090	351 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	GIF	P27352	417 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	FLT3	P36888	993 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	SLC26A3	P40879	764 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	ARHGAP25	P42331	645 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	PRCP	P42785	496 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	CDKN1C	P49918	316 aa	Predicted RBP	4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	RAG2	P55895	527 aa		4.46	□□□□□ -1.7
MSI2-216	ENST00000582772	ATP11A	P98196	1134 aa		4.46	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms