RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TCEAL6Q6IPX3 200 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 DUS1LQ6P1R4 473 aaKnown RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 SLC30A9Q6PML9 568 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 CYP2R1Q6VVX0 501 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 TAF8Q7Z7C8 310 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 DCP2Q8IU60 420 aaKnown RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 KRTCAP2Q8N6L1 136 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 OR8J3Q8NGG0 315 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 CHTF18Q8WVB6 975 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 DNASE2BQ8WZ79 361 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 TCEAL3Q969E4 200 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 TESCQ96BS2 214 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 FAM120BQ96EK7 910 aaKnown RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 KLHDC7BQ96G42 594 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 SCARF2Q96GP6 870 aaPredicted RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 BMFQ96LC9 184 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 PRAP1Q96NZ9 151 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 PANX1Q96RD7 426 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 GPATCH1Q9BRR8 931 aaKnown RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 GTPBP2Q9BX10 602 aaKnown RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 KLHL4Q9C0H6 718 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 PCDHAC1Q9H158 963 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 SRMSQ9H3Y6 488 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 XKR8Q9H6D3 395 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 C6orf106Q9H6K1 298 aaPredicted RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 EBF2Q9HAK2 575 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 FGF22Q9HCT0 170 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 DMRT3Q9NQL9 472 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 TMEM74BQ9NUR3 256 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 FAM120CQ9NX05 1096 aaKnown RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 TRNAU1APQ9NX07 287 aaKnown RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 SH3BP4Q9P0V3 963 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 CD300AQ9UGN4 299 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 SNX7Q9UNH6 387 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 DOLKQ9UPQ8 538 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 CA5BQ9Y2D0 317 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 DLGAP4Q9Y2H0 992 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 WDR37Q9Y2I8 494 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 C15orf41Q9Y2V0 281 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 AP4S1Q9Y587 144 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 SNX13Q9Y5W8 968 aa8.92□□□□□ -0.98
SS18-220ENST00000582092 TP53BP1Q12888 1972 aaPredicted RBP8.92□□□□□ -0.98
SS18-220ENST00000582092 BPTFQ12830 3046 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 TRBV23OR9-2A0A075B6M9 112 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 A0A096LPI6 279 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 PRORSD1PA6NEY8 169 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 AQP12BA6NM10 295 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 OR5K4A6NMS3 321 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 OR52A4PA6NMU1 304 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 PATE3B3GLJ2 98 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 NME4O00746 187 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 ANKRD28O15084 1053 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 SH3BP5O60239 455 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 PRAMEF4O60810 478 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 CER1O95813 267 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 FUCA1P04066 466 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 THEGLP0DJG4 465 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 UMPSP11172 480 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 CD22P20273 847 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 PPIBP23284 216 aaKnown RBP8.91□□□□□ -0.98
SS18-220ENST00000582092 GRIA3P42263 894 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 GSK3BP49841 420 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 MS4A2Q01362 244 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 CYP4F3Q08477 520 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 ZNF763Q0D2J5 394 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 C2orf80Q0P641 193 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 TCEA2Q15560 299 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 HKDC1Q2TB90 917 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 GRAMD1BQ3KR37 738 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 CCNYL2Q5T2Q4 361 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 PRAMEF9Q5VWM5 478 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 ARMC6Q6NXE6 501 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 ABRAXAS1Q6UWZ7 409 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 WASH2PQ6VEQ5 465 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 ZNF621Q6ZSS3 439 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 AMIGO1Q86WK6 493 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 AQP12AQ8IXF9 295 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 LRRC56Q8IYG6 542 aaPredicted RBP8.91□□□□□ -0.98
SS18-220ENST00000582092 PQLC1Q8N2U9 271 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 RNF175Q8N4F7 328 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 LMNTD1Q8N9Z9 388 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 ICA1LQ8NDH6 482 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 OR4E2Q8NGC2 313 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 OR52E1Q8NGJ3 308 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 POP5Q969H6 163 aaKnown RBP8.91□□□□□ -0.98
SS18-220ENST00000582092 TMEM125Q96AQ2 219 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 RGMAQ96B86 450 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 PPCDCQ96CD2 204 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 NSMCE2Q96MF7 247 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 DUSP26Q9BV47 211 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 OR51B5Q9H339 312 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 Q9H521 79 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 PIF1Q9H611 641 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 KIR3DX1Q9H7L2 352 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 NT5DC2Q9H857 520 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 YY1AP1Q9H869 796 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 WASH6PQ9NQA3 447 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 MIEF1Q9NQG6 463 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 TMEM184CQ9NVA4 438 aa8.91□□□□□ -0.98
SS18-220ENST00000582092 CMTM6Q9NX76 183 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms