RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 NPAS2Q99743 824 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 SARGQ9BW04 601 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 ATG10Q9H0Y0 220 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 LANCL2Q9NS86 450 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 ADAMTS6Q9UKP5 1117 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 SH2B3Q9UQQ2 575 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 NAALAD2Q9Y3Q0 740 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 MAD1L1Q9Y6D9 718 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 PDZD2O15018 2839 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 CCDC168Q8NDH2 2452 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 GTF3C1Q12789 2109 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 HIVEP1P15822 2718 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 RDH16O75452 317 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 NEURL1O76050 574 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 SLC35G6P0C7Q6 338 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 CD46P15529 392 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 CD1EP15812 388 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 CAPN3P20807 821 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 EEF1DP29692 281 aaKnown RBP9.97□□□□□ -0.81
RFFL-209ENST00000581265 SSTR2P30874 369 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 RGS4P49798 205 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 SMSP52788 366 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 ADORA2A-AS1P86434 159 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 MPP1Q00013 466 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 ACTN3Q08043 901 aaPredicted RBP9.97□□□□□ -0.81
RFFL-209ENST00000581265 SP140Q13342 867 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 PWP1Q13610 501 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 ABRAXAS2Q15018 415 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 HERC3Q15034 1050 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 TESK1Q15569 626 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 OR1C1Q15619 314 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 C3AR1Q16581 482 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 CYP1B1Q16678 543 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 SFT2D3Q587I9 215 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 PAPD4Q6PIY7 484 aaKnown RBP9.97□□□□□ -0.81
RFFL-209ENST00000581265 STRA8Q7Z7C7 330 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 SPPL2CQ8IUH8 684 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 PALM2Q8IXS6 379 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 RASGEF1CQ8N431 466 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 SLC5A8Q8N695 610 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 HORMAD2Q8N7B1 307 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 NAT8LQ8N9F0 302 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 TMEM178AQ8NBL3 297 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 C2CD4AQ8NCU7 369 aaPredicted RBP9.97□□□□□ -0.81
RFFL-209ENST00000581265 ELP5Q8TE02 316 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 PEX11GQ96HA9 241 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 HAUS8Q9BT25 410 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 FAM167BQ9BTA0 163 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 KLHL1Q9NR64 748 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 ANKRD10Q9NXR5 420 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 TAS2R13Q9NYV9 303 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 TRMT6Q9UJA5 497 aaKnown RBP9.97□□□□□ -0.81
RFFL-209ENST00000581265 SH3BGRL2Q9UJC5 107 aa9.97□□□□□ -0.81
RFFL-209ENST00000581265 GABRR3A8MPY1 467 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 ASNA1O43681 348 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 MAN1A2O60476 641 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 GALR3O60755 368 aaPredicted RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 SP1P08047 785 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 HIST1H2AGP0C0S8 130 aaPredicted RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 ESRRAP11474 423 aaPredicted RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 CDH1P12830 882 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 DRD2P14416 443 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 HOXB4P17483 251 aaPredicted RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 HIST1H2ADP20671 130 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 GABRB3P28472 473 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 CCR8P51685 355 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 SLC26A5P58743 744 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 TAS2R50P59544 299 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 ALDH6A1Q02252 535 aaKnown RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 USP10Q14694 798 aaKnown RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 PHKG1Q16816 387 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 DUPD1Q68J44 220 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 SLC25A25Q6KCM7 469 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 NIPAL1Q6NVV3 410 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 CCDC137Q6PK04 289 aaKnown RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 PAQR3Q6TCH7 311 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 MBOAT1Q6ZNC8 495 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 RPS19BP1Q86WX3 136 aaKnown RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 SIAH3Q8IW03 269 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 ZNF295-AS1Q8N0V1 137 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 MYO1HQ8N1T3 1032 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 ZNF740Q8NDX6 193 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 OR5T3Q8NGG3 340 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 ZCCHC10Q8TBK6 192 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 TBC1D20Q96BZ9 403 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 SNF8Q96H20 258 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 PBKQ96KB5 322 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 HIST1H2AHQ96KK5 128 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 FRMD6Q96NE9 622 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 NDNQ99608 321 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 HIST1H2AJQ99878 128 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 TRIM51Q9BSJ1 452 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 H2AFJQ9BTM1 129 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 HES7Q9BYE0 225 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 TRIM45Q9H8W5 580 aaPredicted RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 CLK4Q9HAZ1 481 aaKnown RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 IARS2Q9NSE4 1012 aaKnown RBP9.96□□□□□ -0.82
RFFL-209ENST00000581265 TINAGQ9UJW2 476 aa9.96□□□□□ -0.82
RFFL-209ENST00000581265 NCOA6Q14686 2063 aaPredicted RBP9.95□□□□□ -0.82
RFFL-209ENST00000581265 MED13LQ71F56 2210 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms