RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 MID1IP1Q9NPA3 183 aa14.81□□□□□ -0.04
SS18-216ENST00000580751 GEMIN8Q9NWZ8 242 aaKnown RBP14.81□□□□□ -0.04
SS18-216ENST00000580751 TRPS1Q9UHF7 1281 aa14.81□□□□□ -0.04
SS18-216ENST00000580751 TRAF6Q9Y4K3 522 aa14.81□□□□□ -0.04
SS18-216ENST00000580751 TMEM184BQ9Y519 407 aaPredicted RBP14.81□□□□□ -0.04
SS18-216ENST00000580751 PCDHGA4Q9Y5G9 962 aa14.81□□□□□ -0.04
SS18-216ENST00000580751 SPTBP11277 2137 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 FEZF1A0PJY2 475 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 FITM1A5D6W6 292 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 TRPC5OSA6NMA1 111 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 C1QTNF9BB2RNN3 333 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 AZIN1O14977 448 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 ZNF749O43361 778 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 OR1F1O43749 312 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 WFS1O76024 890 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 DLGAP3O95886 979 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 CHEK2O96017 543 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 EIF2S1P05198 315 aaKnown RBP14.8□□□□□ -0.04
SS18-216ENST00000580751 SLC35G6P0C7Q6 338 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 C1QTNF9P0C862 333 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 UROSP10746 265 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 LIPCP11150 499 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 AHRP35869 848 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 SCTRP47872 440 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 CCNG1P51959 295 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 ARSFP54793 590 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 EMP3P54852 163 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 DOC2AQ14183 400 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 MAP7Q14244 749 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 RBBP7Q16576 425 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 HIST2H2ACQ16777 129 aaPredicted RBP14.8□□□□□ -0.04
SS18-216ENST00000580751 FAM214AQ32MH5 1076 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 WASHC2DQ5SRD0 308 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 LIPJQ5W064 366 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 HIST2H2AA3Q6FI13 130 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 TMIGD1Q6UXZ0 262 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 ZNF781Q8N8C0 355 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 L3MBTL4Q8NA19 623 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 CAMKVQ8NCB2 501 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 ZNF740Q8NDX6 193 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 SNIP1Q8TAD8 396 aaKnown RBP14.8□□□□□ -0.04
SS18-216ENST00000580751 ZNF473Q8WTR7 871 aaKnown RBP14.8□□□□□ -0.04
SS18-216ENST00000580751 UBE2E3Q969T4 207 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 ATP6V1E2Q96A05 226 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 CLIP3Q96DZ5 547 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 LRFN5Q96NI6 719 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 ELAC2Q9BQ52 826 aaKnown RBP14.8□□□□□ -0.04
SS18-216ENST00000580751 SPNS1Q9H2V7 528 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 NT5DC2Q9H857 520 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 SEMA4BQ9NPR2 832 aaPredicted RBP14.8□□□□□ -0.04
SS18-216ENST00000580751 ZDHHC2Q9UIJ5 367 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 ZFP69BQ9UJL9 534 aa14.8□□□□□ -0.04
SS18-216ENST00000580751 MDC1Q14676 2089 aaKnown RBP14.8□□□□□ -0.04
SS18-216ENST00000580751 UBFD1O14562 309 aaKnown RBP14.79□□□□□ -0.04
SS18-216ENST00000580751 OR7A17O14581 309 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 PRAMEF4O60810 478 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 CLDN9O95484 217 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 NTRK1P04629 796 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 CTSBP07858 339 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 ZNF28P17035 718 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 ARL1P40616 181 aaPredicted RBP14.79□□□□□ -0.04
SS18-216ENST00000580751 HNF4AP41235 474 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 RBBP5Q15291 538 aaKnown RBP14.79□□□□□ -0.04
SS18-216ENST00000580751 PRTGQ2VWP7 1150 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 SDK2Q58EX2 2172 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 SH2D4BQ5SQS7 431 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 PRAMEF9Q5VWM5 478 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 KANK2Q63ZY3 851 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 GRHL2Q6ISB3 625 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 CGB2Q6NT52 195 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 RHBDD2Q6NTF9 364 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 VN1R4Q7Z5H5 301 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 MILR1Q7Z6M3 343 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 ASPGQ86U10 573 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 ZFAND4Q86XD8 727 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 MYLK4Q86YV6 388 aaPredicted RBP14.79□□□□□ -0.04
SS18-216ENST00000580751 ESX1Q8N693 406 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 ZNF248Q8NDW4 579 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 PROKR1Q8TCW9 393 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 NSUN5Q96P11 429 aaKnown RBP14.79□□□□□ -0.04
SS18-216ENST00000580751 SPRY4Q9C004 299 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 FAM107BQ9H098 131 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 ZNF395Q9H8N7 513 aaPredicted RBP14.79□□□□□ -0.04
SS18-216ENST00000580751 TXLNGQ9NUQ3 528 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 MRGBPQ9NV56 204 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 ARL2BPQ9Y2Y0 163 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 USH1CQ9Y6N9 552 aa14.79□□□□□ -0.04
SS18-216ENST00000580751 HYKKA2RU49 373 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 LCMT2O60294 686 aaKnown RBP14.78□□□□□ -0.04
SS18-216ENST00000580751 RAD1O60671 282 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 VPS4BO75351 444 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 CRCPO75575 148 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 KLK3P07288 261 aaPredicted RBP14.78□□□□□ -0.04
SS18-216ENST00000580751 CD22P20273 847 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 SERPINB1P30740 379 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 GCGRP47871 477 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 IRX1P78414 480 aaPredicted RBP14.78□□□□□ -0.04
SS18-216ENST00000580751 TRAF3Q13114 568 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 PWP1Q13610 501 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 MUM1Q2TAK8 710 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms