RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 SEPHS1P49903 392 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 IL11RAQ14626 422 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 LETMD1Q6P1Q0 360 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 FBXO42Q6P3S6 717 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 TMIGD1Q6UXZ0 262 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 RGS9BPQ6ZS82 235 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 ZCCHC23Q6ZST2 131 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 RPS27LQ71UM5 84 aaKnown RBP11.59□□□□□ -0.55
CCDC84-209ENST00000580556 MILR1Q7Z6M3 343 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 BMPERQ8N8U9 685 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 MFSD9Q8NBP5 474 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 OR4F6Q8NGB9 312 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 DYDC1Q8WWB3 177 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 PSMG3-AS1Q96PY0 264 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 OR2A5Q96R48 311 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 KLHL25Q9H0H3 589 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 SLC25A18Q9H1K4 315 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 RHBGQ9H310 441 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 FAM60AQ9NP50 221 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 FBXO8Q9NRD0 319 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 FAM53CQ9NYF3 392 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 ADGRE2Q9UHX3 823 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 HAO1Q9UJM8 370 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 ZNF225Q9UK10 706 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 PPT2Q9UMR5 302 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 PCDHGA7Q9Y5G6 932 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 PCDHGA11Q9Y5H2 935 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 LRRK2Q5S007 2527 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 NBASA2RRP1 2371 aa11.59□□□□□ -0.55
CCDC84-209ENST00000580556 UTP20O75691 2785 aaKnown RBP11.58□□□□□ -0.56
CCDC84-209ENST00000580556 SPTAN1Q13813 2472 aaKnown RBP11.58□□□□□ -0.56
CCDC84-209ENST00000580556 A0A1B0GTL3 188 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 BLACEA4D250 179 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 PPP6CO00743 305 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 TXNDC9O14530 226 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 NRP2O60462 931 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 PRAMEF10O60809 474 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 FGF4P08620 206 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 FOLR1P15328 257 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 TSPAN8P19075 237 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ITIH1P19827 911 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 BCL6P41182 706 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 PIK3CBP42338 1070 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ATP1A2P50993 1020 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 RAB15P59190 212 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ABCE1P61221 599 aaKnown RBP11.58□□□□□ -0.56
CCDC84-209ENST00000580556 SH3BP2P78314 561 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 FOXK1P85037 733 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ZNF33BQ06732 778 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 BST1Q10588 318 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 STX3Q13277 289 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 TUBB3Q13509 450 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ARL13AQ5H913 290 aaPredicted RBP11.58□□□□□ -0.56
CCDC84-209ENST00000580556 TCTE1Q5JU00 501 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 MANEAQ5SRI9 462 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 MED27Q6P2C8 311 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 RNF165Q6ZSG1 346 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 RAB11FIP2Q7L804 512 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 SYVN1Q86TM6 617 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 CUZD1Q86UP6 607 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ZFAND4Q86XD8 727 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 MCATQ8IVS2 390 aaKnown RBP11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ZNF740Q8NDX6 193 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 TRPV3Q8NET8 790 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 OR7G3Q8NG95 312 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 CKAP2Q8WWK9 683 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 RERGQ96A58 199 aaPredicted RBP11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ZNF501Q96CX3 271 aaPredicted RBP11.58□□□□□ -0.56
CCDC84-209ENST00000580556 MOCOSQ96EN8 888 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 MAGEB18Q96M61 343 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 CDK15Q96Q40 435 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 B3GNT4Q9C0J1 378 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 SPNS1Q9H2V7 528 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 MANSC1Q9H8J5 431 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 MID1IP1Q9NPA3 183 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ACSS2Q9NR19 701 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 FGF21Q9NSA1 209 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 THAP1Q9NVV9 213 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 PISDQ9UG56 409 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 ZFP69BQ9UJL9 534 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.58□□□□□ -0.56
CCDC84-209ENST00000580556 RNF11Q9Y3C5 154 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 LOXL2Q9Y4K0 774 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 AP1M2Q9Y6Q5 423 aa11.58□□□□□ -0.56
CCDC84-209ENST00000580556 SNRNP200O75643 2136 aaKnown RBP11.57□□□□□ -0.56
CCDC84-209ENST00000580556 MYO9AB2RTY4 2548 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 USP9YO00507 2555 aaPredicted RBP11.57□□□□□ -0.56
CCDC84-209ENST00000580556 FITM1A5D6W6 292 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 EFCAB7A8K855 629 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 H3BMH7 237 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 OR1F1O43749 312 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 CLEC3AO75596 197 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 HSPA4LO95757 839 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 KRT6AP02538 564 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 KRT6BP04259 564 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 CHRNGP07510 517 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 SLC35G6P0C7Q6 338 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 UROSP10746 265 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 LIPCP11150 499 aa11.57□□□□□ -0.56
CCDC84-209ENST00000580556 SFTPCP11686 197 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms