RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TGDSO95455 350 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 PDYNP01213 254 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 RBMS1P29558 406 aaKnown RBP13.63□□□□□ -0.23
SKA2-205ENST00000580541 CCR10P46092 362 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 GABRA4P48169 554 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 CUL3Q13618 768 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 FAM53BQ14153 422 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 HERC3Q15034 1050 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 MUM1Q2TAK8 710 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 SGO1Q5FBB7 561 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 FRMPD2BQ6IN97 320 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 TMEM126BQ8IUX1 230 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 OR4N4Q8N0Y3 316 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 ZNF781Q8N8C0 355 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 ANKRD53Q8N9V6 530 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 ZNF473Q8WTR7 871 aaKnown RBP13.63□□□□□ -0.23
SKA2-205ENST00000580541 USP7Q93009 1102 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 RGMAQ96B86 450 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 METTL2AQ96IZ6 378 aaKnown RBP13.63□□□□□ -0.23
SKA2-205ENST00000580541 QRFPRQ96P65 431 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 SORT1Q99523 831 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 MTERF1Q99551 399 aaKnown RBP13.63□□□□□ -0.23
SKA2-205ENST00000580541 SIKE1Q9BRV8 207 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 TXLNGQ9NUQ3 528 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 RIC8BQ9NVN3 520 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 SIDT1Q9NXL6 827 aaKnown RBP13.63□□□□□ -0.23
SKA2-205ENST00000580541 VPS29Q9UBQ0 182 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 FIS1Q9Y3D6 152 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 PCDHB3Q9Y5E6 796 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 SLC22A7Q9Y694 548 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 HYKKA2RU49 373 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 LRIT2A6NDA9 550 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 MAGEB17A8MXT2 336 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 HDAC3O15379 428 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 TGFB1P01137 390 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 PIM1P11309 404 aaPredicted RBP13.62□□□□□ -0.23
SKA2-205ENST00000580541 TSFMP43897 325 aaKnown RBP13.62□□□□□ -0.23
SKA2-205ENST00000580541 NEK2P51955 445 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 RAP1GDS1P52306 607 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 MAPK10P53779 464 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 CYP4F2P78329 520 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 PRTGQ2VWP7 1150 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 DEFB110Q30KQ9 67 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 DEPDC1Q5TB30 811 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 KHDRBS2Q5VWX1 349 aaKnown RBP13.62□□□□□ -0.23
SKA2-205ENST00000580541 CLEC6AQ6EIG7 209 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 TRIM40Q6P9F5 258 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 FOXR1Q6PIV2 292 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 PAGE2Q7Z2X7 111 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 DGLUCYQ7Z3D6 616 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 TRIM46Q7Z4K8 759 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 DDIASQ8IXT1 998 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 BMPERQ8N8U9 685 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 OR1L3Q8NH93 324 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 AGR3Q8TD06 166 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 CREB3L4Q8TEY5 395 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 TWIST2Q8WVJ9 160 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 MVB12AQ96EY5 273 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 KCNC2Q96PR1 638 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 C20orf27Q9GZN8 174 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 NRSN2Q9GZP1 204 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 REXO4Q9GZR2 422 aaKnown RBP13.62□□□□□ -0.23
SKA2-205ENST00000580541 SPNS1Q9H2V7 528 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 POLR1BQ9H9Y6 1135 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 CLK4Q9HAZ1 481 aaKnown RBP13.62□□□□□ -0.23
SKA2-205ENST00000580541 DMRT3Q9NQL9 472 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 PISDQ9UG56 409 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 PCDHGA3Q9Y5H0 932 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 DNAJC15Q9Y5T4 150 aa13.62□□□□□ -0.23
SKA2-205ENST00000580541 A0A1B0GTL3 188 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 ZNF749O43361 778 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 SCRG1O75711 98 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 MYO1DO94832 1006 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 SEMA3DO95025 777 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 KLK3P07288 261 aaPredicted RBP13.61□□□□□ -0.23
SKA2-205ENST00000580541 TROVE2P10155 538 aaKnown RBP eCLIP13.61□□□□□ -0.23
SKA2-205ENST00000580541 KITP10721 976 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 CCL4P13236 92 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 PCSK2P16519 638 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 SERPINB3P29508 390 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 ARRB2P32121 409 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 AVPR1BP47901 424 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 FOXA1P55317 472 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 RPS13P62277 151 aaKnown RBP13.61□□□□□ -0.23
SKA2-205ENST00000580541 ABRAXAS2Q15018 415 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 AP5B1Q2VPB7 878 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 C3orf38Q5JPI3 329 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 SPDYAQ5MJ70 313 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 CES4AQ5XG92 561 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 PRMT9Q6P2P2 845 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 VN1R4Q7Z5H5 301 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 PARP9Q8IXQ6 854 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 OR2L5Q8NG80 312 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 GAL3ST3Q96A11 431 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 PPP3R2Q96LZ3 170 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 KCNA7Q96RP8 456 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 DPH2Q9BQC3 489 aaPredicted RBP13.61□□□□□ -0.23
SKA2-205ENST00000580541 TBCDQ9BTW9 1192 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 MS4A8Q9BY19 250 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 TRIM55Q9BYV6 548 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms