RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 SLC41A2Q96JW4 573 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 ZNF514Q96K75 400 aaPredicted RBP3.83□□□□□ -1.8
DDX42-211ENST00000580108 MESP1Q9BRJ9 268 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 CCM2Q9BSQ5 444 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 NDC1Q9BTX1 674 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 AP1M1Q9BXS5 423 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.83□□□□□ -1.8
DDX42-211ENST00000580108 SPRTNQ9H040 489 aaPredicted RBP3.83□□□□□ -1.8
DDX42-211ENST00000580108 CHST8Q9H2A9 424 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 TOR3AQ9H497 397 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 KIR3DX1Q9H7L2 352 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 LRRC40Q9H9A6 602 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 UCK1Q9HA47 277 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 FAM60AQ9NP50 221 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 CASS4Q9NQ75 786 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 FBXO8Q9NRD0 319 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 CHRAC1Q9NRG0 131 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 FGF21Q9NSA1 209 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 STARD5Q9NSY2 213 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 SOHLH2Q9NX45 425 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 LUZP4Q9P127 313 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 GALPQ9UBC7 116 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 POMT2Q9UKY4 750 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 RARRES3Q9UL19 164 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 ZNF148Q9UQR1 794 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 TDRKHQ9Y2W6 561 aaKnown RBP3.83□□□□□ -1.8
DDX42-211ENST00000580108 NFS1Q9Y697 457 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 SCN3AQ9NY46 2000 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 SHANK1Q9Y566 2161 aa3.83□□□□□ -1.8
DDX42-211ENST00000580108 PRRC2CQ9Y520 2896 aaKnown RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 MAST4O15021 2626 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 USP9XQ93008 2570 aaPredicted RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 SLC5A10A0PJK1 596 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 TLCD2A6NGC4 264 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ARGFXA6NJG6 315 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 USP27XA6NNY8 438 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ZAR1LA6NP61 321 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ZNF891A8MT65 544 aaPredicted RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 GPR89AB7ZAQ6 455 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 TMEM150CB9EJG8 249 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 E7EVH7 732 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 H7C0S8 307 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ZNF185O15231 689 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ZW10O43264 779 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 CNOT3O75175 753 aaKnown RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 NIPSNAP2O75323 286 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 LY86O95711 162 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 STATHP02808 62 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 CAPN1P07384 714 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 APRTP07741 180 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 CHRM5P08912 532 aaPredicted RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 GPR89BP0CG08 455 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 CBSLP0DN79 551 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 FGF5P12034 268 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 GYPEP15421 78 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 UGT2B7P16662 529 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 CDH3P22223 829 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 MCM3P25205 808 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 PSMA3P25788 255 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 LMO1P25800 156 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ACADLP28330 430 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 PRDX3P30048 256 aaKnown RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 CCR7P32248 378 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 CBSP35520 551 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 BASP1P80723 227 aaKnown RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 MRPS25P82663 173 aaKnown RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 CDH17Q12864 832 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 MRPL49Q13405 166 aaKnown RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 SEMA5AQ13591 1074 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 RAPSNQ13702 412 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 LAMB3Q13751 1172 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 GRB7Q14451 532 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 KRT33BQ14525 404 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 CLPPQ16740 277 aaPredicted RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 P3H1Q32P28 736 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 GPR33Q49SQ1 333 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 PRR30Q53SZ7 412 aaPredicted RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 CTSL3PQ5NE16 218 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 PLEKHS1Q5SXH7 462 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ZDHHC20Q5W0Z9 365 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 HIST2H2BCQ6DN03 193 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ARMC6Q6NXE6 501 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 FAM198BQ6UWH4 519 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 CDHR3Q6ZTQ4 885 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 OOSP2Q86WS3 158 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 PPP1R3BQ86XI6 285 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ADGRG3Q86Y34 549 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 TMEM126BQ8IUX1 230 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 SLC35F6Q8N357 371 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ENDOVQ8N8Q3 282 aaKnown RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 LINC01555Q8NAE3 123 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 DTX3LQ8TDB6 740 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 COG1Q8WTW3 980 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 TFGQ92734 400 aaPredicted RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 MR1Q95460 341 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ULK4Q96C45 1275 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 ZNF501Q96CX3 271 aaPredicted RBP3.82□□□□□ -1.8
DDX42-211ENST00000580108 MFSD3Q96ES6 412 aa3.82□□□□□ -1.8
DDX42-211ENST00000580108 SLC45A3Q96JT2 553 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms