RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 AHRP35869 848 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 ARHGDIAP52565 204 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 MAPK12P53778 367 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 SRP54P61011 504 aaKnown RBP10.67□□□□□ -0.7
SKA2-204ENST00000578519 RAE1P78406 368 aaKnown RBP10.67□□□□□ -0.7
SKA2-204ENST00000578519 RBBP4Q09028 425 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 EPS8Q12929 822 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 CCINQ13939 588 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 VEZF1Q14119 521 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 PDK3Q15120 406 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 TEAD4Q15561 434 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 MLF2Q15773 248 aaPredicted RBP10.67□□□□□ -0.7
SKA2-204ENST00000578519 ADRM1Q16186 407 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 KIAA0895LQ68EN5 471 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 FAM71E1Q6IPT2 247 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 ANO7Q6IWH7 933 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 TRIM40Q6P9F5 258 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 TMEM154Q6P9G4 183 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 SYT13Q7L8C5 426 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 AMIGO2Q86SJ2 522 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 NUDT13Q86X67 352 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 TRIM48Q8IWZ4 208 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 KBTBD2Q8IY47 623 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 LILRA2Q8N149 483 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 GALNT4Q8N4A0 578 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 MARVELD2Q8N4S9 558 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 ZNF548Q8NEK5 533 aaPredicted RBP10.67□□□□□ -0.7
SKA2-204ENST00000578519 OR52E1Q8NGJ3 308 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 OR4A15Q8NGL6 344 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 HMGB4Q8WW32 186 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 LCN9Q8WX39 176 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 THAP11Q96EK4 314 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 ZNF764Q96H86 408 aaPredicted RBP10.67□□□□□ -0.7
SKA2-204ENST00000578519 EGLN2Q96KS0 407 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 ZNF597Q96LX8 424 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 CHID1Q9BWS9 393 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 OSBPL10Q9BXB5 764 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 ROGDIQ9GZN7 287 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 OR51B5Q9H339 312 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 PIF1Q9H611 641 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 COQ10BQ9H8M1 238 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 SERHLQ9NQF3 203 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 AGPAT4Q9NRZ5 378 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 TM7SF3Q9NS93 570 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 USP36Q9P275 1121 aaKnown RBP10.67□□□□□ -0.7
SKA2-204ENST00000578519 ANKMY1Q9P2S6 941 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 CFAP20Q9Y6A4 193 aaKnown RBP10.67□□□□□ -0.7
SKA2-204ENST00000578519 A0A1W2PRB8 838 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 FAM221BA6H8Z2 402 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 URADA6NGE7 173 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 PRR19A6NJB7 356 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 ISM1B1AKI9 464 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 H7BY64 318 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 LATO43561 262 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 RASGRP1O95267 797 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 ABCB1P08183 1280 aaPredicted RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 DRD2P14416 443 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 ACTR1BP42025 376 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 MAGEA8P43361 318 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 TSFMP43897 325 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 ANXA11P50995 505 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 CHN2P52757 468 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 TAS2R50P59544 299 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 ACTR1AP61163 376 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 STXBP1P61764 594 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 PPP2CBP62714 309 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 PPP2CAP67775 309 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 PHC1P78364 1004 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 CSNK1G2P78368 415 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 FADDQ13158 208 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 PDE7AQ13946 482 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 ELOAQ14241 798 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 KIR2DS3Q14952 304 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 SF1Q15637 639 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 TMEM92Q6UXU6 159 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 DNAJC14Q6Y2X3 702 aaPredicted RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 ANKRD46Q86W74 232 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 AMIGO1Q86WK6 493 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 RBM12BQ8IXT5 1001 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 SVOPLQ8N434 492 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 DTWD1Q8N5C7 304 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 C2orf73Q8N5S3 287 aaPredicted RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 MFSD2AQ8NA29 543 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 GOT1L1Q8NHS2 421 aaPredicted RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 OR1E3Q8WZA6 343 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 GATA6Q92908 595 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 SLC47A1Q96FL8 570 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 BMFQ96LC9 184 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 PRAP1Q96NZ9 151 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 SEPHS2Q99611 448 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 INPP5KQ9BT40 448 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 TBCDQ9BTW9 1192 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 MS4A8Q9BY19 250 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 NLNQ9BYT8 704 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 PCED1AQ9H1Q7 454 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 SLC6A17Q9H1V8 727 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 SEMA6AQ9H2E6 1030 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 RPF2Q9H7B2 306 aaKnown RBP10.66□□□□□ -0.7
SKA2-204ENST00000578519 TPT1P8Q9HAU6 139 aa10.66□□□□□ -0.7
SKA2-204ENST00000578519 FZD3Q9NPG1 666 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms