RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 NKX2-8O15522 239 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 NDUFS4O43181 175 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PRAMEF4O60810 478 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 KLF7O75840 302 aaPredicted RBP13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 MED26O95402 600 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 IGHEP01854 428 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 KRT4P19013 534 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 FBLP22087 321 aaKnown RBP13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 IL10P22301 178 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 EEF1DP29692 281 aaKnown RBP13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 OR1D4P47884 311 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 CDC20Q12834 499 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 SLC9A5Q14940 896 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 C10orf62Q5T681 223 aaPredicted RBP13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PRAMEF9Q5VWM5 478 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 GRHL2Q6ISB3 625 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 MED27Q6P2C8 311 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ABHD13Q7L211 337 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 GOLGA7Q7Z5G4 137 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 TRABD2AQ86V40 505 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 RAB43Q86YS6 212 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 LAS2Q8IYD9 372 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 AFAP1L2Q8N4X5 818 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 L3MBTL4Q8NA19 623 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 KCT2Q8NC54 265 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 SRFBP1Q8NEF9 429 aaKnown RBP13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 RDH11Q8TC12 318 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 CREB3L4Q8TEY5 395 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 REPS1Q96D71 796 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 MMABQ96EY8 250 aaPredicted RBP13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 VPS50Q96JG6 964 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 TGIF2Q9GZN2 237 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 IPPKQ9H8X2 491 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 MKKSQ9NPJ1 570 aaPredicted RBP13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 C14orf105Q9NVL8 296 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ZNF282Q9UDV7 671 aaPredicted RBP13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ZNF490Q9ULM2 529 aaPredicted RBP13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 POLHQ9Y253 713 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ASPMQ8IZT6 3477 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 A0A0A6YYC8 382 aaPredicted RBP13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 I3L1I5 382 aaPredicted RBP13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PCDH17O14917 1159 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 SIX3O95343 332 aaPredicted RBP13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 CLDN9O95484 217 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 SERPIND1P05546 499 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 CYC1P08574 325 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 RPS17P08708 135 aaKnown RBP13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 SMIM10L1P0DMW3 83 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ALOX12P18054 663 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 IMPDH1P20839 514 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 FOLR3P41439 243 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PRKAA2P54646 552 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 HERVK_113P63132 956 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 TGM3Q08188 693 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ERV3-1Q14264 604 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 NKG7Q16617 165 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 C16orf46Q6P387 395 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 LRIG3Q6UXM1 1119 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 COX15Q7KZN9 410 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 LSM14AQ8ND56 463 aaKnown RBP13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ATP6V1E2Q96A05 226 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 SMIM10Q96HG1 83 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ERVK-6Q9BXR3 956 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ACTR8Q9H981 624 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PSD3Q9NYI0 1048 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PCTPQ9UKL6 214 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 STK38LQ9Y2H1 464 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PTRH2Q9Y3E5 179 aaKnown RBP13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 MRPS18BQ9Y676 258 aaKnown RBP13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 MAU2Q9Y6X3 613 aa13.19□□□□□ -0.3
SNORD3B-1-201ENST00000577988 KMT2BQ9UMN6 2715 aaPredicted RBP13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 A0A088AWK7 358 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 H0YIV9 168 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 H3BQF6 201 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ERVH48-1M5A8F1 160 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 DLX3O60479 287 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PLIN3O60664 434 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 OTCP00480 354 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PROCP04070 461 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 MYL2P10916 166 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 CD22P20273 847 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ZNF10P21506 573 aaPredicted RBP13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PIK3CBP42338 1070 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 CCNG1P51959 295 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ARFIP1P53367 373 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 PHEXP78562 749 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ADPRMQ3LIE5 342 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 KRT71Q3SY84 523 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 BEND6Q5SZJ8 279 aaPredicted RBP13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ZYG11AQ6WRX3 759 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 CHSY3Q70JA7 882 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 HOMEZQ8IX15 550 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.18□□□□□ -0.38e-6■■■■■ 36.8
SNORD3B-1-201ENST00000577988 AMER3Q8N944 861 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 OR7G3Q8NG95 312 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 STT3BQ8TCJ2 826 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 ADAMTS17Q8TE56 1095 aa13.18□□□□□ -0.3
SNORD3B-1-201ENST00000577988 UTP15Q8TED0 518 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms