RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 EPS8L2Q9H6S3 715 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 NMRAL1Q9HBL8 299 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 SEMA3GQ9NS98 782 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 CTSFQ9UBX1 484 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 CCDC88CQ9P219 2028 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 NUP210LQ5VU65 1888 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 KCNE1BA0A087WTH5 132 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 A0A087X1B8 175 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 SLC35E2BP0CK96 405 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 CDH1P12830 882 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 TYK2P29597 1187 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 MSH2P43246 934 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 OR1D4P47884 311 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 SERPINB9P50453 376 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 TLR1Q15399 786 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 ZRSR2Q15696 482 aaKnown RBP15.19■□□□□ 0.02
VAPA-204ENST00000577901 RBBP7Q16576 425 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 PRTGQ2VWP7 1150 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 CDKL4Q5MAI5 379 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 GARNL3Q5VVW2 1013 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 PRMT9Q6P2P2 845 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 THOC6Q86W42 341 aaKnown RBP15.19■□□□□ 0.02
VAPA-204ENST00000577901 PLD3Q8IV08 490 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 TBC1D19Q8N5T2 526 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 METTL27Q8N6F8 245 aaPredicted RBP15.19■□□□□ 0.02
VAPA-204ENST00000577901 ABHD11Q8NFV4 315 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 OR11G2Q8NGC1 345 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 STAG3L4Q8TBR4 150 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 FAR1Q8WVX9 515 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 SLC44A1Q8WWI5 657 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 SLC5A11Q8WWX8 675 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 KIAA1191Q96A73 305 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 THOC3Q96J01 351 aaKnown RBP15.19■□□□□ 0.02
VAPA-204ENST00000577901 VPS50Q96JG6 964 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 CNOT10Q9H9A5 744 aaKnown RBP15.19■□□□□ 0.02
VAPA-204ENST00000577901 RNF112Q9ULX5 631 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 CDC14AQ9UNH5 594 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 SLC22A14Q9Y267 594 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 KCNE2Q9Y6J6 123 aa15.19■□□□□ 0.02
VAPA-204ENST00000577901 NCF1BA6NI72 391 aaPredicted RBP15.18■□□□□ 0.02
VAPA-204ENST00000577901 VSTM2BA6NLU5 285 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 NCF1CA8MVU1 366 aaPredicted RBP15.18■□□□□ 0.02
VAPA-204ENST00000577901 POC1B-GALNT4F8VUJ3 575 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 S100BP04271 92 aaPredicted RBP15.18■□□□□ 0.02
VAPA-204ENST00000577901 LTA4HP09960 611 aaKnown RBP15.18■□□□□ 0.02
VAPA-204ENST00000577901 NCF1P14598 390 aaPredicted RBP15.18■□□□□ 0.02
VAPA-204ENST00000577901 SERPINB8P50452 374 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 Q0VFX4 171 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 BMPR2Q13873 1038 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 NDUFA9Q16795 377 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 HKDC1Q2TB90 917 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 UBAP2Q5T6F2 1119 aaKnown RBP15.18■□□□□ 0.02
VAPA-204ENST00000577901 SULT1C3Q6IMI6 304 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 ISLR2Q6UXK2 745 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 LINC00696Q6ZRV3 163 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 EIF1ADQ8N9N8 165 aaKnown RBP15.18■□□□□ 0.02
VAPA-204ENST00000577901 LRRN4CLQ8ND94 238 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 OR4K1Q8NGD4 311 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 RHBDF1Q96CC6 855 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 MVB12AQ96EY5 273 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 OR4K3Q96R72 315 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 CAPS2Q9BXY5 557 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 ZNF304Q9HCX3 659 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 SH2B3Q9UQQ2 575 aa15.18■□□□□ 0.02
VAPA-204ENST00000577901 RUVBL1Q9Y265 456 aaKnown RBP15.18■□□□□ 0.02
VAPA-204ENST00000577901 ABCA12Q86UK0 2595 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 A0A096LPK6 155 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 ARHGAP10A1A4S6 786 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 HMX2A2RU54 273 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 PRPF4O43172 522 aaKnown RBP eCLIP15.17■□□□□ 0.02
VAPA-204ENST00000577901 HNRNPRO43390 633 aaKnown RBP15.17■□□□□ 0.02
VAPA-204ENST00000577901 ZNF500O60304 480 aaPredicted RBP15.17■□□□□ 0.02
VAPA-204ENST00000577901 ZG16O60844 167 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 KRT38O76015 456 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 WDR47O94967 919 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 C2P06681 752 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 TFEBP19484 476 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 CNTFP26441 200 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 MFAP5Q13361 173 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 OR4D1Q15615 310 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 FAM83EQ2M2I3 478 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 TEX35Q5T0J7 233 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 LGSNQ5TDP6 509 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 FAM180AQ6UWF9 173 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 ISCA2Q86U28 154 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 CAMKVQ8NCB2 501 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 CATSPER1Q8NEC5 780 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 UHMK1Q8TAS1 419 aaKnown RBP15.17■□□□□ 0.02
VAPA-204ENST00000577901 NEIL2Q969S2 332 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 MARVELD3Q96A59 401 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 LMF1Q96S06 567 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 PAFAH2Q99487 392 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 CRB3Q9BUF7 120 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 ALG9Q9H6U8 611 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 SNX15Q9NRS6 342 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 WWOXQ9NZC7 414 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 CD274Q9NZQ7 290 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 ENTPD4Q9Y227 616 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 MAU2Q9Y6X3 613 aa15.17■□□□□ 0.02
VAPA-204ENST00000577901 CROCCQ5TZA2 2017 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms