RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 KANK2Q63ZY3 851 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 HIST2H2AA3Q6FI13 130 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 IRGCQ6NXR0 463 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 MED27Q6P2C8 311 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TMIGD1Q6UXZ0 262 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TMPRSS11BQ86T26 416 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TAX1BP1Q86VP1 789 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 BPHLQ86WA6 291 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 LRRC34Q8IZ02 419 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 C19orf47Q8N9M1 422 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 OR7G3Q8NG95 312 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 REPS1Q96D71 796 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 METTL2AQ96IZ6 378 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 FAR2Q96K12 515 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TGM7Q96PF1 710 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 GFM1Q96RP9 751 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 BRF2Q9HAW0 419 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SLCO1B3Q9NPD5 702 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ACSS2Q9NR19 701 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 VTI1BQ9UEU0 232 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZFP69BQ9UJL9 534 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SNX6Q9UNH7 406 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 DNAJC15Q9Y5T4 150 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 AP1M2Q9Y6Q5 423 aa10.65□□□□□ -0.7
CDK5RAP3-204ENST00000577664 NBASA2RRP1 2371 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SLC9B1P1A6NJY1 282 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TCP11X1B4DZS4 312 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CASC3O15234 703 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 KIF1CO43896 1103 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CTSVO60911 334 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CLEC3AO75596 197 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 LYPLA1O75608 230 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 HSPA4LO95757 839 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CAPN1P07384 714 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TSPAN8P19075 237 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CDH3P22223 829 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PRPH2P23942 346 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 VARSP26640 1264 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 GYS2P54840 703 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 EMP3P54852 163 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 INHBCP55103 352 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FOXA1P55317 472 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 INSM1Q01101 510 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TLE1Q04724 770 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PWP1Q13610 501 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SPIDRQ14159 915 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ZRSR2Q15696 482 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 RBBP7Q16576 425 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ADPRMQ3LIE5 342 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CACHD1Q5VU97 1274 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FRG2Q64ET8 278 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CRLF3Q8IUI8 442 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FAM20CQ8IXL6 584 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FAM26EQ8N5C1 309 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TBC1D19Q8N5T2 526 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ZNF781Q8N8C0 355 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 DCBLD1Q8N8Z6 715 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ANKRD53Q8N9V6 530 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MFSD9Q8NBP5 474 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TRPV3Q8NET8 790 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 METTL6Q8TCB7 284 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CREB3L4Q8TEY5 395 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 KCNE4Q8WWG9 221 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 NAF1Q96HR8 494 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PPM1MQ96MI6 270 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TMEM74Q96NL1 305 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CDK15Q96Q40 435 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FRG2BQ96QU4 278 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ZFYVE21Q9BQ24 234 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SIKE1Q9BRV8 207 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SPNS1Q9H2V7 528 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FAM60AQ9NP50 221 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PDE7BQ9NP56 450 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SIRT5Q9NXA8 310 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TMEM9Q9P0T7 183 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CCL27Q9Y4X3 112 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PCDHGA4Q9Y5G9 962 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CSMD1Q96PZ7 3565 aa10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SNRNP200O75643 2136 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SETD2Q9BYW2 2564 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FBN3Q75N90 2809 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FITM1A5D6W6 292 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 GMNCA6NCL1 334 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 HAT1O14929 419 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 POLR3GO15318 223 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 HDAC3O15379 428 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ULK1O75385 1050 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TBX6O95947 436 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 KRT6AP02538 564 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 KRT6BP04259 564 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SERPINA6P08185 405 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 KRT6CP48668 564 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PDX1P52945 283 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CUL3Q13618 768 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TSTA3Q13630 321 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SLBPQ14493 270 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CPSF6Q16630 551 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 LINC00303Q3SY05 128 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SH2D4BQ5SQS7 431 aa10.63□□□□□ -0.71
CDK5RAP3-204ENST00000577664 RBM44Q6ZP01 1051 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms