RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 CLIC3O95833 236 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 DNTTP04053 509 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 KRT8P05787 483 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 GSNP06396 782 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 DRD1P21728 446 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 ITPKAP23677 461 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 EEF1B2P24534 225 aaKnown RBP13.3□□□□□ -0.28
RNF43-202ENST00000577625 CASP3P42574 277 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 POLR2JP52435 117 aaKnown RBP13.3□□□□□ -0.28
RNF43-202ENST00000577625 PLA2G16P53816 162 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 NFE2L1Q14494 772 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 CPSF6Q16630 551 aaKnown RBP eCLIP13.3□□□□□ -0.28
RNF43-202ENST00000577625 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.3□□□□□ -0.28
RNF43-202ENST00000577625 PRAMEF9Q5VWM5 478 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 LAYNQ6UX15 382 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 PRR23CQ6ZRP0 262 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 USP51Q70EK9 711 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 CHST15Q7LFX5 561 aaPredicted RBP13.3□□□□□ -0.28
RNF43-202ENST00000577625 PIWIL3Q7Z3Z3 882 aaKnown RBP13.3□□□□□ -0.28
RNF43-202ENST00000577625 SPRED1Q7Z699 444 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 SLCO6A1Q86UG4 719 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 DHFR2Q86XF0 187 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 LSMEM1Q8N8F7 131 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 TP53I13Q8NBR0 393 aaPredicted RBP13.3□□□□□ -0.28
RNF43-202ENST00000577625 OR2T34Q8NGX1 318 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 GANCQ8TET4 914 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 FKBP10Q96AY3 582 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 SNX18Q96RF0 628 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 HOPXQ9BPY8 73 aaPredicted RBP13.3□□□□□ -0.28
RNF43-202ENST00000577625 C1QTNF2Q9BXJ5 285 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 TEX101Q9BY14 249 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 CCM2LQ9NUG4 571 aaPredicted RBP13.3□□□□□ -0.28
RNF43-202ENST00000577625 CD300AQ9UGN4 299 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 SNX6Q9UNH7 406 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 PRKAB1Q9Y478 270 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 GPSM3Q9Y4H4 160 aa13.3□□□□□ -0.28
RNF43-202ENST00000577625 PRR23AA6NEV1 266 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 MGAT4DA6NG13 374 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 FXYD1O00168 92 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 CDK2AP1O14519 115 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 MAN1A2O60476 641 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 UGDHO60701 494 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 C1orf105O95561 183 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 G6PDP11413 515 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 GSTM2P28161 218 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 TEAD1P28347 426 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 IL12AP29459 219 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 GNPDA1P46926 289 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 YAP1P46937 504 aaKnown RBP13.29□□□□□ -0.28
RNF43-202ENST00000577625 ADPRHP54922 357 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 RPS21P63220 83 aaKnown RBP13.29□□□□□ -0.28
RNF43-202ENST00000577625 PRKG2Q13237 762 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 INPP5AQ14642 412 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 IMPG1Q17R60 797 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
RNF43-202ENST00000577625 CDONQ4KMG0 1287 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 SAMD4BQ5PRF9 694 aaKnown RBP13.29□□□□□ -0.28
RNF43-202ENST00000577625 UBE2UQ5VVX9 321 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 PRMT9Q6P2P2 845 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 AGTRAPQ6RW13 159 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 CYP20A1Q6UW02 462 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 FAM83HQ6ZRV2 1179 aaPredicted RBP13.29□□□□□ -0.28
RNF43-202ENST00000577625 RGL4Q8IZJ4 473 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 MINDY1Q8N5J2 469 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 OR14C36Q8NHC7 312 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 CANT1Q8WVQ1 401 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 KLK6Q92876 244 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 TRIM63Q969Q1 353 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 PKP4Q99569 1192 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 AGPAT4Q9NRZ5 378 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 ASIC5Q9NY37 505 aa13.29□□□□□ -0.28
RNF43-202ENST00000577625 POLR3HQ9Y535 204 aaPredicted RBP13.29□□□□□ -0.28
RNF43-202ENST00000577625 PRORSD1PA6NEY8 169 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 CCDC154A6NI56 674 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 ANKRD28O15084 1053 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 MBTPS2O43462 519 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 EEDO75530 441 aaKnown RBP13.28□□□□□ -0.28
RNF43-202ENST00000577625 SLC16A8O95907 504 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 PAK4O96013 591 aaPredicted RBP13.28□□□□□ -0.28
RNF43-202ENST00000577625 BMP4P12644 408 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 SLC2A4P14672 509 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 IMPA1P29218 277 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 TRIM23P36406 574 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 SERPINB10P48595 397 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 RPL38P63173 70 aaKnown RBP13.28□□□□□ -0.28
RNF43-202ENST00000577625 MRPS21P82921 87 aaKnown RBP13.28□□□□□ -0.28
RNF43-202ENST00000577625 HMGCS1Q01581 520 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 FOXM1Q08050 763 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 SMAD4Q13485 552 aaKnown RBP13.28□□□□□ -0.28
RNF43-202ENST00000577625 CYBRD1Q53TN4 286 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 KIAA1161Q6NSJ0 714 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 TRMT11Q7Z4G4 463 aaKnown RBP13.28□□□□□ -0.28
RNF43-202ENST00000577625 ZFAND4Q86XD8 727 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 FUNDC2Q9BWH2 189 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 DPEP2Q9H4A9 486 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 ACTL8Q9H568 366 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 WDR26Q9H7D7 661 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 C12orf10Q9HB07 376 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 POLE4Q9NR33 117 aa13.28□□□□□ -0.28
RNF43-202ENST00000577625 INTS7Q9NVH2 962 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms