RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ABATP80404 500 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 LTBQ06643 244 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 KLF1Q13351 362 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 GXYLT1Q4G148 440 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 CES3Q6UWW8 571 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 MDGA2Q7Z553 956 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 PCGF5Q86SE9 256 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 SLC26A11Q86WA9 606 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 LRRC6Q86X45 466 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 LIX1LQ8IVB5 337 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 REXO1L1PQ8IX06 675 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 CYP4X1Q8N118 509 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 LGI4Q8N135 537 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 OTUD6BQ8N6M0 293 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 POGLUT1Q8NBL1 392 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 OR10Q1Q8NGQ4 319 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 NINJ1Q92982 152 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 TMEM125Q96AQ2 219 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 TM4SF19Q96DZ7 209 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 PWWP2AQ96N64 755 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 SLC30A3Q99726 388 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 POLDIP3Q9BY77 421 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 ANKHQ9HCJ1 492 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 TREX1Q9NSU2 369 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 TMEM184CQ9NVA4 438 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 PACSIN2Q9UNF0 486 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 NAALAD2Q9Y3Q0 740 aa9.47□□□□□ -0.89
NPLOC4-220ENST00000576940 FBN3Q75N90 2809 aa9.46□□□□□ -0.89
NPLOC4-220ENST00000576940 ZNF407Q9C0G0 2248 aa9.46□□□□□ -0.89
NPLOC4-220ENST00000576940 KCNE1BA0A087WTH5 132 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 A8MUA0 341 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 MAGEB17A8MXT2 336 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 NPIPA2E9PIF3 369 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 NPIPA3F8WFD2 350 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 B4GALT2O60909 372 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 B3GALT4O96024 378 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 IFNB1P01574 187 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 CATP04040 527 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 F7P08709 466 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 TRHRP34981 398 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 HSD17B2P37059 387 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 FDFT1P37268 417 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 COILP38432 576 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 OLR1P78380 273 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 BTG2P78543 158 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 SPA17Q15506 151 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 ARHGAP11AQ6P4F7 1023 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 CNGA4Q8IV77 575 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 ZZZ3Q8IYH5 903 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 CLYBLQ8N0X4 340 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 OR5M9Q8NGP3 310 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 OR5M3Q8NGP4 307 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 SLC13A3Q8WWT9 602 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 ATG4AQ8WYN0 398 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 LPGAT1Q92604 370 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 PEX13Q92968 403 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 MFSD3Q96ES6 412 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 EBNA1BP2Q99848 306 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 GPATCH1Q9BRR8 931 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 RAB6BQ9NRW1 208 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 PNPLA3Q9NST1 481 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 SH2B3Q9UQQ2 575 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 KLF13Q9Y2Y9 288 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 L3MBTL1Q9Y468 752 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 DNAJC13O75165 2243 aa9.46□□□□□ -0.9
NPLOC4-220ENST00000576940 PHF3Q92576 2039 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 FAM237BA0A1B0GVD1 139 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 PINLYPA6NC86 204 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 ZNF839A8K0R7 811 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 CDK2AP1O14519 115 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 SLC16A5O15375 505 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 KIF5CO60282 957 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 VAPBO95292 243 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 APRTP07741 180 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 FHP07954 510 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 ZSCAN5DPP0CG00 497 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 FOSL1P15407 271 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 ARNTP27540 789 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 IMPA1P29218 277 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 ATP5DP30049 168 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 STIP1P31948 543 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 RPS15AP62244 130 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 HYAL2Q12891 473 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 TBX2Q13207 712 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 CUL1Q13616 776 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 ZNF585AQ6P3V2 769 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 ARSKQ6UWY0 536 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 CYHR1Q6ZMK1 362 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 ACAD11Q709F0 780 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 SDCCAG8Q86SQ7 713 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 ASPGQ86U10 573 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 MPP5Q8N3R9 675 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 TC2NQ8N9U0 490 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 ZFP62Q8NB50 900 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 CAMKVQ8NCB2 501 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 NFAM1Q8NET5 270 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 TBC1D20Q96BZ9 403 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 PTCHD1Q96NR3 888 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 DEFB126Q9BYW3 111 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms