RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 DEFB126Q9BYW3 111 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 TTTY12Q9BZ98 90 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 HSD3B7Q9H2F3 369 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 LDAHQ9H6V9 325 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 EXO5Q9H790 373 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 ANKHQ9HCJ1 492 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 ALKBH4Q9NXW9 302 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 DDX56Q9NY93 547 aaKnown RBP5.5□□□□□ -1.53
SMG6-219ENST00000575663 SAE1Q9UBE0 346 aaPredicted RBP5.5□□□□□ -1.53
SMG6-219ENST00000575663 ERVK-11Q9UQG0 969 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 PCDHA3Q9Y5H8 950 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 HIVEP2P31629 2446 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 ANKRD12Q6UB98 2062 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 CCDC88CQ9P219 2028 aa5.5□□□□□ -1.53
SMG6-219ENST00000575663 COL6A5A8TX70 2615 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 A0A1B0GVC2 190 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 SAGE2PA6NJ88 616 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 A8MVJ9 347 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 EEF1E1-BLOC1S5C9J1V9 151 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 KPNA5O15131 536 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 P2RX6O15547 441 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 EEF1E1O43324 174 aaKnown RBP5.49□□□□□ -1.53
SMG6-219ENST00000575663 SUSD5O60279 629 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 KIF5CO60282 957 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 CST8O60676 142 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 C1orf105O95561 183 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 IGHG3P01860 377 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 HRGP04196 525 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 TP53P04637 393 aaPredicted RBP5.49□□□□□ -1.53
SMG6-219ENST00000575663 SERPING1P05155 500 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 TPM1P09493 284 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 TPH1P17752 444 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 IL1RNP18510 177 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 FPR1P21462 350 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 PSMB4P28070 264 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 FOXN2P32314 431 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 BCL6P41182 706 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 SSR4P51571 173 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 SKP1P63208 163 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 MEF2AQ02078 507 aaPredicted RBP5.49□□□□□ -1.53
SMG6-219ENST00000575663 RHAGQ02094 409 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 POU6F1Q14863 301 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 POU4F3Q15319 338 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 LRRC38Q5VT99 294 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 KCTD11Q693B1 232 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 RTL6Q6ICC9 239 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 AFTPHQ6ULP2 937 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 MDGA2Q7Z553 956 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 FBXW8Q8N3Y1 598 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 ARHGEF39Q8N4T4 335 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 PLPP5Q8NEB5 264 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 OR2M7Q8NG81 312 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 SMPDL3AQ92484 453 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 SMPDL3BQ92485 455 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 SYN2Q92777 582 aaPredicted RBP5.49□□□□□ -1.53
SMG6-219ENST00000575663 TSLPQ969D9 159 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 HAUS1Q96CS2 278 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 PERPQ96FX8 193 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 CDKN2AIPNLQ96HQ2 116 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 OR2A5Q96R48 311 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 GORASP1Q9BQQ3 440 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 CARD6Q9BX69 1037 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 SPTLC3Q9NUV7 552 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 HPF1Q9NWY4 346 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 ZNF629Q9UEG4 869 aaPredicted RBP5.49□□□□□ -1.53
SMG6-219ENST00000575663 TAC3Q9UHF0 121 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 TTC7AQ9ULT0 858 aaPredicted RBP5.49□□□□□ -1.53
SMG6-219ENST00000575663 EIF3LQ9Y262 564 aaKnown RBP5.49□□□□□ -1.53
SMG6-219ENST00000575663 DRG1Q9Y295 367 aaKnown RBP5.49□□□□□ -1.53
SMG6-219ENST00000575663 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.49□□□□□ -1.53
SMG6-219ENST00000575663 LIPGQ9Y5X9 500 aa5.49□□□□□ -1.53
SMG6-219ENST00000575663 INTS1Q8N201 2190 aaKnown RBP5.49□□□□□ -1.53
SMG6-219ENST00000575663 A0A087X0T9 212 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 IGKV1-8A0A0C4DH67 115 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 TRBV11-1A0A0K0K1C0 115 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 MACROD2A1Z1Q3 448 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 OR2W5A6NFC9 320 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 OR51F1A6NGY5 319 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 H7C0C1 242 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 SGK494L7N484 410 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 CLDN4O14493 209 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 HAT1O14929 419 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 CASKO14936 926 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 SLC16A5O15375 505 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 WIPF1O43516 503 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 OR1I1O60431 355 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 HCN1O60741 890 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 RDH16O75452 317 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 ITGA10O75578 1167 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 CNOT4O95628 575 aaKnown RBP5.48□□□□□ -1.53
SMG6-219ENST00000575663 IL2RAP01589 272 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 FHP07954 510 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 SLC35G6P0C7Q6 338 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 FAM228BP0C875 321 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 ERGP11308 486 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 TNNT1P13805 278 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 CTNNA2P26232 953 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 RBL1P28749 1068 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 HSD17B2P37059 387 aa5.48□□□□□ -1.53
SMG6-219ENST00000575663 CDKN2BP42772 138 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms