RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CCNYL3P0C7X3 344 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 NR2F6P10588 404 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 ITPKBP27987 946 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 PSMB5P28074 263 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 FEN1P39748 380 aaKnown RBP9.72□□□□□ -0.85
SMG6-213ENST00000573166 UFM1P61960 85 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 GRM7Q14831 915 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 PPP1R3AQ16821 1122 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 PYCR3Q53H96 274 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 OTUD3Q5T2D3 398 aaPredicted RBP9.72□□□□□ -0.85
SMG6-213ENST00000573166 RNF220Q5VTB9 566 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 TMEM26Q6ZUK4 368 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 OR7G3Q8NG95 312 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 TRPV5Q9NQA5 729 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 ANAPC2Q9UJX6 822 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 DNAJC15Q9Y5T4 150 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 DPPA5A6NC42 116 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 ANHXE9PGG2 379 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 PDE9AO76083 593 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 HSD3B1P14060 373 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 HSD3B2P26439 372 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 GTF2E2P29084 291 aaKnown RBP9.72□□□□□ -0.85
SMG6-213ENST00000573166 HTR6P50406 440 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 REP15Q6BDI9 236 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 TNFAIP8L2Q6P589 184 aaPredicted RBP9.72□□□□□ -0.85
SMG6-213ENST00000573166 OR6C4Q8NGE1 309 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 DGAT2Q96PD7 388 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 BDH2Q9BUT1 245 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 KRCC1Q9NPI7 259 aaPredicted RBP9.72□□□□□ -0.85
SMG6-213ENST00000573166 CNOT6Q9ULM6 557 aaKnown RBP9.72□□□□□ -0.85
SMG6-213ENST00000573166 PRPF19Q9UMS4 504 aaKnown RBP9.72□□□□□ -0.85
SMG6-213ENST00000573166 HCN4Q9Y3Q4 1203 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 SPTA1P02549 2419 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 WDR81Q562E7 1941 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 DFNA5O60443 496 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 ALBP02768 609 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 CHRNB1P11230 501 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 ETV4P43268 484 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 CASP9P55211 416 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 PTGR1Q14914 329 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 ALG11Q2TAA5 492 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 SPANXN4Q5MJ08 99 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 LETMD1Q6P1Q0 360 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 SLC37A2Q8TED4 501 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 PRR11Q96HE9 360 aaPredicted RBP9.72□□□□□ -0.85
SMG6-213ENST00000573166 IMPAD1Q9NX62 359 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 ZIM2Q9NZV7 527 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 H2AFY2Q9P0M6 372 aaPredicted RBP9.72□□□□□ -0.85
SMG6-213ENST00000573166 SLC9A8Q9Y2E8 581 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 AK5Q9Y6K8 562 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 ASXL3Q9C0F0 2248 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 A0A0J9YY10 115 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 KRT87PA6NCN2 255 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 SDHDO14521 159 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 MTTPP55157 894 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 TCTE1Q5JU00 501 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 METRNLQ641Q3 311 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 LCTLQ6UWM7 567 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.71□□□□□ -0.85
SMG6-213ENST00000573166 KLHDC8AQ8IYD2 350 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 PDPRQ8NCN5 879 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 C11orf65Q8NCR3 313 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 GPR151Q8TDV0 419 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 KIAA1143Q96AT1 154 aaPredicted RBP9.71□□□□□ -0.85
SMG6-213ENST00000573166 ZNF419Q96HQ0 510 aaPredicted RBP9.71□□□□□ -0.85
SMG6-213ENST00000573166 P2RY12Q9H244 342 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 MS4A12Q9NXJ0 267 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 ANKMY1Q9P2S6 941 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 SEC14L3Q9UDX4 400 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 TBC1D29Q9UFV1 150 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 SAC3D1A6NKF1 404 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 RSL1D1O76021 490 aaKnown RBP9.71□□□□□ -0.85
SMG6-213ENST00000573166 SLCO2B1O94956 709 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 LDOC1O95751 146 aaPredicted RBP9.71□□□□□ -0.85
SMG6-213ENST00000573166 ALOX12P18054 663 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 VHLP40337 213 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 ACY1Q03154 408 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 PRDX1Q06830 199 aaKnown RBP9.71□□□□□ -0.85
SMG6-213ENST00000573166 BNIP2Q12982 314 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 SLAMF1Q13291 335 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 GPR18Q14330 331 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 C1orf189Q5VU69 101 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 ZBTB49Q6ZSB9 765 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 OR8K5Q8NH50 307 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 OR10A6Q8NH74 314 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 SLC35G5Q96KT7 338 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 PTCHD1Q96NR3 888 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 NDEL1Q9GZM8 345 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 GSTO2Q9H4Y5 243 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 EPHA6Q9UF33 1036 aa9.71□□□□□ -0.85
SMG6-213ENST00000573166 FAM220BPB1ANY3 271 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PEX12O00623 359 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PPP6CO00743 305 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 YKT6O15498 198 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 SERPINI2O75830 405 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 PGRP06401 933 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 ETS2P15036 469 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 GRB7Q14451 532 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 GCNT6Q5T4J0 391 aa9.71□□□□□ -0.86
SMG6-213ENST00000573166 GRHL2Q6ISB3 625 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms