RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 NDUFAF4Q9P032 175 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 SEC14L4Q9UDX3 406 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 TEKT2Q9UIF3 430 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 POLR2AP24928 1970 aaKnown RBP16.21■□□□□ 0.19
LITAF-209ENST00000571688 LTBP3Q9NS15 1303 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 MAGEB17A8MXT2 336 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 GPR39O43194 453 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 CYP17A1P05093 508 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 EPB42P16452 691 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 GPC1P35052 558 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 SOX3P41225 446 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 UPP1Q16831 310 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 PDZK1Q5T2W1 519 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 LPCAT1Q8NF37 534 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 MSLNLQ96KJ4 702 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 DOHHQ9BU89 302 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 APOL5Q9BWW9 433 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.21■□□□□ 0.195e-7■■□□□ 11.6
LITAF-209ENST00000571688 ALG5Q9Y673 324 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 H7C0S8 307 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 SCAMP3O14828 347 aaKnown RBP16.21■□□□□ 0.19
LITAF-209ENST00000571688 TSPAN3O60637 253 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 SCN2BO60939 215 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 PDE9AO76083 593 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 PSKH1P11801 424 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 PIPP12273 146 aaPredicted RBP16.21■□□□□ 0.19
LITAF-209ENST00000571688 PTX3P26022 381 aaPredicted RBP16.21■□□□□ 0.19
LITAF-209ENST00000571688 MICAQ29983 383 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 HKDC1Q2TB90 917 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 ZNF621Q6ZSS3 439 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 RASAL3Q86YV0 1011 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 LGI4Q8N135 537 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 FBXL6Q8N531 539 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 CAMKK1Q8N5S9 505 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 RPRD1AQ96P16 312 aaPredicted RBP16.21■□□□□ 0.19
LITAF-209ENST00000571688 HDHD5Q9BXW7 423 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 EIF3KQ9UBQ5 218 aaKnown RBP16.21■□□□□ 0.19
LITAF-209ENST00000571688 STUB1Q9UNE7 303 aa16.21■□□□□ 0.19
LITAF-209ENST00000571688 HYKKA2RU49 373 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 FABP12A6NFH5 140 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 A8MVJ9 347 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 CCNB2O95067 398 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 CTPS1P17812 591 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 PRPH2P23942 346 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 CRYBB1P53674 252 aaPredicted RBP16.2■□□□□ 0.18
LITAF-209ENST00000571688 WNT3P56703 355 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 CPSF6Q16630 551 aaKnown RBP eCLIP16.2■□□□□ 0.18
LITAF-209ENST00000571688 DUSP28Q4G0W2 176 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 METTL2BQ6P1Q9 378 aaKnown RBP16.2■□□□□ 0.18
LITAF-209ENST00000571688 KIAA1143Q96AT1 154 aaPredicted RBP16.2■□□□□ 0.18
LITAF-209ENST00000571688 OMA1Q96E52 524 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 CHST8Q9H2A9 424 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 TLR8Q9NR97 1041 aaKnown RBP16.2■□□□□ 0.18
LITAF-209ENST00000571688 PCDHB1Q9Y5F3 818 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 AP1M2Q9Y6Q5 423 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 PLXNA3P51805 1871 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 TMCC2O75069 709 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 CLDN9O95484 217 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 SNAI1O95863 264 aaPredicted RBP16.2■□□□□ 0.18
LITAF-209ENST00000571688 LGI1O95970 557 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 PSMA1P25786 263 aaKnown RBP16.2■□□□□ 0.18
LITAF-209ENST00000571688 MAPK1P28482 360 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 RPL9P32969 192 aaKnown RBP16.2■□□□□ 0.18
LITAF-209ENST00000571688 BRCC3P46736 316 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 MAPKAPK2P49137 400 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 CDC42P60953 191 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 FAM205BPQ63HN1 556 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 SDE2Q6IQ49 451 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 PLET1Q6UQ28 207 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 TMC8Q8IU68 726 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 UBE2J2Q8N2K1 259 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 ESX1Q8N693 406 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 OR4M2Q8NGB6 313 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 CREB3L4Q8TEY5 395 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 SELENOMQ8WWX9 145 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 SLC25A46Q96AG3 418 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 MYEOVQ96EZ4 313 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 CMTM7Q96FZ5 175 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 ZC3HAV1LQ96H79 300 aaKnown RBP16.2■□□□□ 0.18
LITAF-209ENST00000571688 OGDHLQ9ULD0 1010 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 HSPB11Q9Y547 144 aa16.2■□□□□ 0.18
LITAF-209ENST00000571688 INSIG1O15503 277 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 NUDT7P0C024 238 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 HOXD9P28356 352 aaPredicted RBP16.19■□□□□ 0.18
LITAF-209ENST00000571688 DSC3Q14574 896 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 EXOC3L2Q2M3D2 409 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 PAN2Q504Q3 1202 aaKnown RBP16.19■□□□□ 0.18
LITAF-209ENST00000571688 TRIM69Q86WT6 500 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 PSKH2Q96QS6 385 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 SPATA9Q9BWV2 254 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 ABCG8Q9H221 673 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 ING3Q9NXR8 418 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 SH3BP4Q9P0V3 963 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 ITM2BQ9Y287 266 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 ADM5C9JUS6 153 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 NFKBIEO00221 500 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 CSO75390 466 aaKnown RBP16.19■□□□□ 0.18
LITAF-209ENST00000571688 IGHA2P01877 340 aa16.19■□□□□ 0.18
LITAF-209ENST00000571688 PCSK2P16519 638 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms