RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 KIF18BQ86Y91 864 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 ATPAF2Q8N5M1 289 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 TEX26Q8N6G2 289 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 NAXEQ8NCW5 288 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 OR2L2Q8NH16 312 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 C16orf52Q8NHV5 167 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 FLVCR1-AS1Q8TAF5 88 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 IGFBPL1Q8WX77 278 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 SMPDL3BQ92485 455 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 OSBPL9Q96SU4 736 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 TTC1Q99614 292 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 CCM2Q9BSQ5 444 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 AARSD1Q9BTE6 412 aaKnown RBP6.46□□□□□ -1.38
CHD3-213ENST00000571249 HGH1Q9BTY7 390 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 SELENOOQ9BVL4 669 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 GPR63Q9BZJ6 419 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 THAP2Q9H0W7 228 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 ZNF696Q9H7X3 374 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 ANKZF1Q9H8Y5 726 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 BPIFA1Q9NP55 256 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 ARGLU1Q9NWB6 273 aaPredicted RBP6.46□□□□□ -1.38
CHD3-213ENST00000571249 ALKBH4Q9NXW9 302 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 STOX2Q9P2F5 926 aaPredicted RBP6.46□□□□□ -1.38
CHD3-213ENST00000571249 LPAR3Q9UBY5 353 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHD3-213ENST00000571249 ICKQ9UPZ9 632 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 TTLL3Q9Y4R7 772 aa6.46□□□□□ -1.38
CHD3-213ENST00000571249 V9GYY5 206 aaPredicted RBP6.46□□□□□ -1.38
CHD3-213ENST00000571249 PCLOQ9Y6V0 5065 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 LOC100653049A0A140TA62 436 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 ISM1B1AKI9 464 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 KDM4EB2RXH2 506 aaPredicted RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 FAM47E-STBD1D6RA91 191 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 KLRC4-KLRK1H3BQV0 150 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 QSOX1O00391 747 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 BCKDKO14874 412 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 SLC16A5O15375 505 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 PEX1O43933 1283 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 UGT1A9O60656 530 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 KRT34O76011 436 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 CHRM5P08912 532 aaPredicted RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 PAX1P15863 534 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 UGT1A6P19224 532 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 NFKB1P19838 968 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 MAGP20916 626 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 GRIA3P42263 894 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 COMPP49747 757 aaPredicted RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 AGFG1P52594 562 aaKnown RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 FMO1Q01740 532 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 TAP2Q03519 686 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 PCDH1Q08174 1060 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 BBS9Q3SYG4 887 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 FBLN7Q53RD9 439 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 TCTE1Q5JU00 501 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 LDLRAP1Q5SW96 308 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 TEX35Q5T0J7 233 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 PLAG1Q6DJT9 500 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 PPP1R2P3Q6NXS1 205 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 PRMT9Q6P2P2 845 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 POMZP3Q6PJE2 187 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 SEM1Q6ZVN7 128 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 NLRC3Q7RTR2 1065 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 RHOT2Q8IXI1 618 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 SYCE1Q8N0S2 351 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 LRRC17Q8N6Y2 441 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 ARRDC2Q8TBH0 407 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 CREB3L4Q8TEY5 395 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 HES6Q96HZ4 224 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 PBKQ96KB5 322 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 NSUN5Q96P11 429 aaKnown RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 SMC6Q96SB8 1091 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 PARD6BQ9BYG5 372 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 CDCP1Q9H5V8 836 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 PPCSQ9HAB8 311 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 UGT1A7Q9HAW7 530 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 UGT1A10Q9HAW8 530 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 UGT1A8Q9HAW9 530 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 ZNF701Q9NV72 531 aaPredicted RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 ETNK2Q9NVF9 386 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 TMEM160Q9NX00 188 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 CWC15Q9P013 229 aaKnown RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 TRPC4Q9UBN4 977 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 MTRF1LQ9UGC7 380 aaKnown RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 FBXO9Q9UK97 447 aaPredicted RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 TTC7AQ9ULT0 858 aaPredicted RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 EIF3LQ9Y262 564 aaKnown RBP6.45□□□□□ -1.38
CHD3-213ENST00000571249 ZNF711Q9Y462 761 aa6.45□□□□□ -1.38
CHD3-213ENST00000571249 FITM1A5D6W6 292 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 HSPB2A8KAH6 182 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 DVL2O14641 736 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 PRPSAP2O60256 369 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 SHOX2O60902 331 aaPredicted RBP6.44□□□□□ -1.38
CHD3-213ENST00000571249 B3GALT4O96024 378 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 CYP1A2P05177 515 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 C8orf89P0DMQ9 161 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 MSH3P20585 1137 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 AMPD1P23109 780 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 SHMT2P34897 504 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 CYB561P49447 251 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 WNT3P56703 355 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms