RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 SOX11P35716 441 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 HNF4AP41235 474 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 PGGT1BP53609 377 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 OR4D2P58180 307 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 ILF2Q12905 390 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 PWP1Q13610 501 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 ABRAXAS2Q15018 415 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 RBBP5Q15291 538 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 INAQ16352 499 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 MEP1AQ16819 746 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 DEFB134Q4QY38 66 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 CATSPEREQ5SY80 951 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 STEAP4Q687X5 459 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 GFRALQ6UXV0 394 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 CAPN12Q6ZSI9 719 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 ANKRD37Q7Z713 158 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 TMPRSS11BQ86T26 416 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 THOC6Q86W42 341 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 CREG2Q8IUH2 290 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 ZBED8Q8IZ13 594 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 CYP4X1Q8N118 509 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 TRPV3Q8NET8 790 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 ABHD11Q8NFV4 315 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 OR56A3Q8NH54 315 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 CDKL2Q92772 493 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 IMMP1LQ96LU5 166 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 TSNARE1Q96NA8 513 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 OR1F2PQ96R84 312 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 BARD1Q99728 777 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 OLFM1Q99784 485 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 AIF1LQ9BQI0 150 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 RBCK1Q9BYM8 510 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 RNF32Q9H0A6 362 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 GPAMQ9HCL2 828 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 CTNNAL1Q9UBT7 734 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 ZFP69BQ9UJL9 534 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 SLC22A14Q9Y267 594 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 SNX24Q9Y343 169 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 PTPN13Q12923 2485 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 NPEPPSL1A6NEC2 478 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 OR2W5A6NFC9 320 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 MAGEB17A8MXT2 336 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 CDC7O00311 574 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 CHST10O43529 356 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 GALR3O60755 368 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 PRAMEF2O60811 474 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 B4GALT2O60909 372 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 MLYCDO95822 493 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 TSPAN12O95859 305 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 FHP07954 510 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 ZNF888P0CJ79 500 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 RNF224P0DH78 156 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 ZNF37AP17032 561 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 AHRP35869 848 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 HNMTP50135 292 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 TAS2R39P59534 338 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 RAB8AP61006 207 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 OLR1P78380 273 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 OC90Q02509 493 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 RBPJQ06330 500 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 FRG1Q14331 258 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 SFT2D3Q587I9 215 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 ACER2Q5QJU3 275 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 PLAG1Q6DJT9 500 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 PAPD4Q6PIY7 484 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 MAATS1Q7Z4T9 603 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 ADAMTSL2Q86TH1 951 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 ZC3HC1Q86WB0 502 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 PDSS2Q86YH6 399 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 SLC5A8Q8N695 610 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 HORMAD2Q8N7B1 307 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 ZNF740Q8NDX6 193 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 PLPP5Q8NEB5 264 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 ARMC2Q8NEN0 867 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 OR4K1Q8NGD4 311 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 OR5T3Q8NGG3 340 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 DNAJB8Q8NHS0 232 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 M1APQ8TC57 530 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 PYROXD1Q8WU10 500 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 CCT6BQ92526 530 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 NR4A3Q92570 626 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 NEIL2Q969S2 332 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 TBC1D20Q96BZ9 403 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 TSPAN17Q96FV3 270 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 FAR2Q96K12 515 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 PTCHD1Q96NR3 888 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 UTP23Q9BRU9 249 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 DPH5Q9H2P9 285 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 RHBGQ9H310 441 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 PELI2Q9HAT8 420 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 SEC14L3Q9UDX4 400 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 BSNQ9UPA5 3926 aa8.42□□□□□ -1.06
NPLOC4-204ENST00000570324 UQCRHLA0A096LP55 91 aa8.41□□□□□ -1.06
NPLOC4-204ENST00000570324 WIPF3A6NGB9 483 aa8.41□□□□□ -1.06
NPLOC4-204ENST00000570324 E2F3O00716 465 aa8.41□□□□□ -1.06
NPLOC4-204ENST00000570324 PRMT3O60678 531 aa8.41□□□□□ -1.06
NPLOC4-204ENST00000570324 WDR47O94967 919 aa8.41□□□□□ -1.06
NPLOC4-204ENST00000570324 UNC5CO95185 931 aa8.41□□□□□ -1.06
NPLOC4-204ENST00000570324 S100BP04271 92 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-204ENST00000570324 RNH1P13489 461 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms